Thermus scotoductus: TSC_c08230
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Entry
TSC_c08230 CDS
T01414
Symbol
rrmJ
Name
(GenBank) ribosomal RNA large subunit methyltransferase J
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
tsc
Thermus scotoductus
Brite
KEGG Orthology (KO) [BR:
tsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsc03009
]
TSC_c08230 (rrmJ)
Enzymes [BR:
tsc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
TSC_c08230 (rrmJ)
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
TSC_c08230 (rrmJ)
Ribosome biogenesis [BR:
tsc03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
TSC_c08230 (rrmJ)
23S rRNA modification factors
TSC_c08230 (rrmJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_25
Methyltransf_11
Methyltransf_12
SYY_C-terminal
S4_2
Methyltransf_31
TyrRSs_C
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
ADW21449
UniProt:
E8PNH4
LinkDB
All DBs
Position
complement(775225..775959)
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AA seq
244 aa
AA seq
DB search
MRLDRYLVERGLAESREKAQRLIQSGQVKVAGQVVTKPAHRVPEGAQVEVLSPERYVSRG
AYKLLGALEAFAVKVEGKVAADIGASTGGFTQVLLERGARRVYAVDVGRDQLHPRLREDS
RVVSLEEQDARSLLLPEPVDLVVMDVSFISSTLLLSKVKELLKPGGEALILVKPQFELGP
GVHKGVVREEGLRQKALARVREKARELGFQVLGETESPLPGKEGNREFWLWLGFILEEDL
GLKP
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
gtgaggctagaccgctacctggtggaaaggggcctggcggaaagccgggagaaggcccag
aggctcatccaatctggccaggtcaaggtggccgggcaggtggtgaccaagcccgcccac
agggtgccggaaggagcccaggtggaggtcctctccccggaacggtacgtgagccgggga
gcctacaaactgctgggggccctcgaggcctttgccgtgaaggtggagggcaaggtggcc
gcggacatcggggccagcaccggcgggttcacccaggtgctcctggaaaggggtgccagg
cgggtctatgcggtggacgtgggcagggatcagctccacccccgtctaagggaggattcc
cgggtggtgagcctcgaggagcaggacgccaggagcctccttcttcccgagcccgtggac
ctggtggtgatggacgtgtccttcatctcctccaccctgcttctttccaaggtaaaggag
ctccttaagccgggaggcgaggccctcatcttggtgaagccccagtttgagctgggcccc
ggggtgcacaagggagtggtgcgggaggaaggcctccggcaaaaggccctggcccgggtg
cgggagaaggcccgggagctgggctttcaggtgctgggggaaacggaaagtcccttgcca
ggcaaggagggaaaccgggagttttggctttggcttggattcatcctagaagaagaccta
ggcttaaagccctga
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integrated database retrieval system
