Thermus scotoductus: TSC_c08540
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Entry
TSC_c08540 CDS
T01414
Name
(GenBank) uracil-DNA glycosylase, family 4
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tsc
Thermus scotoductus
Pathway
tsc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TSC_c08540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsc03400
]
TSC_c08540
Enzymes [BR:
tsc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
TSC_c08540
DNA repair and recombination proteins [BR:
tsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TSC_c08540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ADW21480
UniProt:
E8PNK5
LinkDB
All DBs
Position
complement(802238..802855)
Genome browser
AA seq
205 aa
AA seq
DB search
MTLELLQAQAKACTACRLAEGRTQVVFGEGNPDAQLMIVGEGPGEEEDKTGRPFVGKAGQ
LLNRILEAAGIPRESVYITNIVKCRPPGNRAPLPDEAKVCTDKWLLKQIELIAPQIIVPL
GAVAAEFFLGEKVSITKVRGQWFEWHGIRVFPMFHPAYLLRNPSRTPGSPKHLTWLDIQE
VKRALDALPPKERRQVKAVSQEPLF
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgaccctggaactgctacaagcccaggccaaggcctgcaccgcctgccgcctggccgaa
ggccgcacccaggtggtcttcggggaagggaaccccgacgcccagctgatgatcgtgggg
gaagggccgggcgaggaagaggacaagacggggcgccccttcgtggggaaagcggggcag
cttctcaaccggatcctcgaggccgccggcatcccccgggaatccgtgtacatcaccaac
atcgtcaagtgccgccccccgggaaaccgcgcccccctgcccgacgaggccaaggtctgc
acggacaagtggctcctcaagcagatcgagctcatcgccccccagatcatcgtccccttg
ggggcggtggcggcggagttcttcctcggggagaaggtttccatcaccaaggtgcggggg
cagtggtttgagtggcacggaatccgggtctttcccatgttccaccccgcctacctcctg
agaaacccaagccgcaccccgggaagccccaaacacctcacctggctggacatccaggag
gtgaagcgagccctggacgccctcccccccaaggagcgccgccaggtgaaggcggtaagc
caggaacccctcttctag
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