Thermus scotoductus: TSC_c09390
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Entry
TSC_c09390 CDS
T01414
Symbol
polA2
Name
(GenBank) DNA polymerase I, thermostable
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tsc
Thermus scotoductus
Pathway
tsc03030
DNA replication
tsc03410
Base excision repair
tsc03420
Nucleotide excision repair
tsc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TSC_c09390 (polA2)
03410 Base excision repair
TSC_c09390 (polA2)
03420 Nucleotide excision repair
TSC_c09390 (polA2)
03440 Homologous recombination
TSC_c09390 (polA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsc03032
]
TSC_c09390 (polA2)
03400 DNA repair and recombination proteins [BR:
tsc03400
]
TSC_c09390 (polA2)
Enzymes [BR:
tsc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TSC_c09390 (polA2)
DNA replication proteins [BR:
tsc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
TSC_c09390 (polA2)
DNA repair and recombination proteins [BR:
tsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
TSC_c09390 (polA2)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TSC_c09390 (polA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
Taq-exonuc
5_3_exonuc
TraI_hel_assoc_N
HHH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ADW21564
UniProt:
E8PP18
LinkDB
All DBs
Position
889676..892168
Genome browser
AA seq
830 aa
AA seq
DB search
MLPLFEPKGRVLLVDGHHLAYRTFFALKGLTTSRGEPVQAVYGFAKSLLKALREDGDVVI
VVFDAKAPSFRHQTYEAYKAGRAPTPEDFPRQLALIKEMVDLLGLERLEVPGFEADDVLA
TLAKKAEKEGYEVRILTADRDLYQLLSERISILHPEGYLITPEWLWEKYGLKPSQWVDYR
ALAGDPSDNIPGVKGIGEKTAAKLIREWGSLENLLKHLEQVKPASVREKILSHMEDLKLS
LELSRVHTDLPLQVDFARRREPDREGLKAFLERLEFGSLLHEFGLLESPVAAEEAPWPPP
EGAFVGYVLSRPEPMWAELNALAAAWEGRVYRAEDPLEALRGLGEVRGLLAKDLAVLALR
EGIALAPGDDPMLLAYLLDPSNTAPEGVARRYGGEWTEEAGERALLSERLYAALLERLKG
EERLLWLYEEVEKPLSRVLAHMEATGVRLDVAYLKALSLEVEAELRRLEEEVHRLAGHPF
NLNSRDQLERVLFDELGLPAIGKTEKTGKRSTSAAVLEALREAHPIVDRILQYRELSKLK
GTYIDPLPALVHPKTNRLHTRFNQTATATGRLSSSDPNLQNIPVRTPLGQRIRRAFVAEE
GWRLVVLDYSQIELRVLAHLSGDENLIRVFQEGQDIHTQTASWMFGVPPEAVDSLMRRAA
KTINFGVLYGMSAHRLSGELAIPYEEAVAFIERYFQSYPKVRAWIEKTLAEGRERGYVET
LFGRRRYVPDLASRVKSIREAAERMAFNMPVQGTAADLMKLAMVKLFPRLQELGARMLLQ
VHDELVLEAPKEQAEEVAQEAKRTMEEVWPLKVPLEVEVGIGEDWLSAKA
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccctctttgagcccaagggccgggtgcttctggtggacggccaccacctggcc
taccgtaccttttttgccctgaagggcctcaccaccagccgcggggagccggtccaggcg
gtgtacgggtttgccaagagccttttgaaggcgctaagggaagacggggatgtggtgatc
gtggtgtttgacgccaaggccccctccttccgccaccagacctacgaggcctacaaggcg
gggcgggctcccacccccgaggactttccccggcagcttgcccttatcaaggagatggtg
gaccttttgggcctggagcgcctcgaggtgccgggctttgaggcggatgacgtcctggct
accctggccaagaaggcggaaaaggaaggctacgaggtgcgcatcctcaccgcggatcgg
gacctttaccagcttctttcggagcgaatctccatccttcacccggagggttacctgatc
accccggagtggctttgggagaagtatgggcttaagccttcccagtgggtggactaccgg
gccttggccggggacccttccgacaacatccccggcgtgaagggcatcggggagaagacg
gcggccaagctgatccgggagtggggaagcctggaaaaccttcttaagcacctggaacag
gtgaaacctgcctccgtgcgggagaagatccttagccacatggaggacctcaagctatcc
ctggagctatcccgggtgcacacggacttgccccttcaggtggacttcgcccggcgccgg
gagccggaccgggaggggcttaaggcctttttggagaggctggagttcggaagcctcctc
cacgagttcggcctgttggaaagcccggtggcggcggaggaagctccctggccgcccccc
gagggagccttcgtggggtacgttctttcccgccccgagcccatgtgggcggagcttaac
gccttggccgccgcctgggagggaagggtttaccgggcggaggatcccttggaggccttg
cgggggcttggggaggtgagggggcttttggccaaggacctggcggtgctggccctgagg
gaagggattgccctggcaccgggcgacgaccccatgctcctcgcctacctcctggatcct
tccaacaccgcccccgaaggggtagcccggcgctacgggggggagtggaccgaggaggcg
ggggaaagggcgttgctttccgaaaggctttacgccgccctcctggagcggcttaagggg
gaggagaggcttctttggctttacgaggaggtggaaaagcccctttcgcgggtcctggcc
cacatggaggccacgggggtacggttggatgtggcctacttaaaggccctttccctggag
gtggaggcggagctcaggcgcctcgaggaggaggtccaccgcctggccgggcatcctttc
aacctgaactcccgggaccagctggaaagggtcctctttgacgagcttgggcttcccgcc
atcggcaagacggagaagacgggcaagcgctccaccagcgccgccgttttggaggccttg
cgggaggctcatcccatcgtggaccgcatccttcagtaccgggagctttccaagctcaag
ggaacctacatcgatcccttgcctgccctggtccaccccaagacgaaccgcctccacacc
cgtttcaaccagacggccaccgccacggggaggcttagcagctcggatcccaacctgcaa
aatatccccgtgcgcacccctttgggccagcggatccgccgggccttcgtggccgaggag
gggtggaggctggtggttttggactacagccagattgagctcagggtcctggcgcacctt
tccggggacgagaacctaatccgggtcttccaggagggccaggacatccacacccagacg
gccagctggatgttcggcgtgcccccagaggccgtggattccctgatgcgccgggcggcc
aagaccatcaacttcggcgtcctctacggcatgtccgcccaccggctttcgggagagctg
gccatcccctacgaggaggcggtggccttcatcgagcggtatttccagagctaccccaag
gtgcgggcctggattgagaaaaccctggcggaaggacgggaacggggctatgtggaaacc
ctctttggccgccggcgctacgtgcccgacttggcttcccgggtgaagagcatccgggag
gcagcggagcgcatggccttcaacatgccggtccaggggaccgccgcggatttgatgaaa
ctggccatggtgaagctctttcccaggcttcaggagctgggggccaggatgcttttgcag
gtgcacgacgaactggtcctcgaggctcccaaggagcaagcggaggaagtcgcccaggag
gccaagcggaccatggaggaggtgtggcccctgaaggtgcccttggaggtggaagtgggc
atcggggaggactggctttccgccaaggcctag
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