Thermus scotoductus: TSC_c09520
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Entry
TSC_c09520 CDS
T01414
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tsc
Thermus scotoductus
Pathway
tsc00061
Fatty acid biosynthesis
tsc00071
Fatty acid degradation
tsc01100
Metabolic pathways
tsc01212
Fatty acid metabolism
tsc02024
Quorum sensing
tsc04146
Peroxisome
Module
tsc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tsc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
TSC_c09520
00071 Fatty acid degradation
TSC_c09520
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
TSC_c09520
09145 Cellular community - prokaryotes
02024 Quorum sensing
TSC_c09520
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tsc01004
]
TSC_c09520
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tsc04147
]
TSC_c09520
Enzymes [BR:
tsc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
TSC_c09520
Lipid biosynthesis proteins [BR:
tsc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
TSC_c09520
Exosome [BR:
tsc04147
]
Exosomal proteins
Exosomal proteins of breast milk
TSC_c09520
Exosomal proteins of breast cancer cells
TSC_c09520
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ADW21577
UniProt:
E8PPB1
LinkDB
All DBs
Position
complement(904546..906399)
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AA seq
617 aa
AA seq
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MEGTLLAYLYQHASREPEAPALRVKRLGVWQKTSWKDLLDRTLSLAGGLWALGLGEGEVL
AILGHNAPEWVEAELAAQALGALPMGIYADAMPEEVGYFLEFTGAKGIVVSDEEQLDKVY
PHLHLVQFVLVWEEAGMSRHFQGKVRRFSQAFGDPRVGEEALKKRRPEEVALLAPTSGTT
GRSKLAMLSHQNLLAGHYALREALGFQKGAWVFSYLPLPWIGEQMLTVVQGLVEGSTVHF
PEDPTTLREDLKEVQPDFFLAPPRLWEDMASLIQSRMVDADLLKAFFYRVGMGALLEGAS
REFRGEKVSLWLNLKRALFYPLIARPLRARLGLAACRIAVTGGAPLGPEVFTFFRALGLD
IRQVYGQSETAAATTAHTTGDAPPETVGPPLPHTEVRISEEGEIQVKGPQVFQGYFRQEK
ATEESFTEDGFFRTGDAGFFDERGHLVILGRVKEVGALADGTRFAPQFMENRLKYSPYIR
EAVVLGHGRPFVTALIELDPENVQNWARKRGIPFTTYLSLTERPEVKALIAEEIRMVNQT
LPEKLKIQRFAILPKELHPDDEEITRTRKVRRQVVEARYGPVIQALYGEGGRVEVVLPIR
YLEGEGRLEATLEVQEV
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaacgttgctcgcttacctgtaccagcatgctagccgggagccagaggcccca
gcccttagggtgaagcggcttggggtctggcagaagacctcctggaaggaccttttggac
cgcaccctaagcctggccggggggttatgggccttgggcctgggggaaggtgaggtcctg
gccattcttgggcacaacgcccccgagtgggtggaggccgagctggctgcccaagccttg
ggagccttgcccatgggcatctacgcggacgctatgcccgaggaggtgggctacttcctg
gagttcaccggggccaagggcatcgtggtctccgacgaggagcagctggacaaggtctac
ccgcacctgcacctggtgcagttcgtcctggtctgggaggaggcggggatgtcccgtcac
ttccagggcaaggtgcggcgcttcagccaggccttcggggatcccagggtgggcgaggaa
gccctgaaaaagcgccgccccgaggaggtggccctcctcgcccccacctcgggcaccacg
gggaggagcaagctggccatgctctcccaccagaatcttctcgccggccattatgccctg
cgggaagccctgggcttccagaaaggggcctgggtcttcagctacctgcccctcccctgg
atcggggaacagatgctcaccgtggtgcaaggcctggtggaaggatccaccgtgcacttc
cccgaggaccccaccaccctccgggaagatctgaaagaggtccagcccgatttcttcctg
gcccccccgaggctttgggaggacatggccagcctcatccaaagccgcatggtggatgcc
gatctcctgaaggccttcttctaccgcgtggggatgggagcccttctggaaggggcgagc
cgcgagttccggggggagaaggtgagcctttggctcaacctaaagcgggccctcttctac
cccctcatcgccaggcccctaagggccaggctaggccttgccgcctgccgcatcgccgtc
accgggggtgcccctttaggccccgaggtcttcaccttcttccgcgccttaggcctggac
atccgccaggtctacggccagtcggaaaccgcagccgccaccaccgcccacaccaccggg
gatgccccgccggagaccgtgggaccacccctgccccacacggaggtgcgcatcagcgag
gaaggggagatccaggtcaaggggccccaggtcttccagggctatttccgccaggagaag
gccaccgaggaaagcttcaccgaggatggcttcttccgcaccggggatgcgggcttcttt
gacgagcgggggcatctggtgatcctgggccgggtgaaggaggtgggtgcccttgcggat
gggacccgctttgccccacagtttatggaaaaccgcctgaaatactccccctatatccgc
gaggccgtggtgctggggcacggaagaccctttgtcacggccctcatcgagctggatccg
gaaaacgtgcagaactgggccaggaaacggggcattccctttaccacctacctatccctc
acggaacggcccgaggtcaaggccttgatcgccgaggagatccgcatggtgaaccagacc
cttcccgaaaagctcaagatccagcgcttcgccatccttcccaaggagctccaccccgac
gacgaggagatcacccgtacccgcaaggtgcgccgccaggtggtggaggcccgctacggc
ccggtgatccaggccctctacggggagggcggaagggtggaggtggtgcttcccatccgc
tacctggaaggagaagggaggctcgaggccaccttagaggtgcaggaggtctag
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