Thermus scotoductus: TSC_c12070
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Entry
TSC_c12070 CDS
T01414
Name
(GenBank) transcriptional regulator, LacI family
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
tsc
Thermus scotoductus
Brite
KEGG Orthology (KO) [BR:
tsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsc03000
]
TSC_c12070
Transcription factors [BR:
tsc03000
]
Prokaryotic type
Helix-turn-helix
LacI family
TSC_c12070
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_31
HTH_3
HTH_38
HTH_Tnp_ISL3
HTH_Crp_2
Sigma70_r4
HTH_IclR
HTH_7
Sigma70_r4_2
HTH_26
MarR
HTH_28
HTH_23
HTH_11
MarR_2
HTH_24
HTH_5
TnsD
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
ADW21827
UniProt:
E8PQP5
LinkDB
All DBs
Position
complement(1148315..1149292)
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AA seq
325 aa
AA seq
DB search
METRKKLTIKEIARLANVSVGTVSRVLNGRPGVSPETRARVLEVVRTQGFVPNAAARELV
GQSTAVGLLLAPGVRRYTPYFTLLLEALSEEVWRLGLRVMEVATDTRGLPLEKARAYLLL
GAHDHDPRIETLRKDNVPFVLIGCYPGTFWVAPDDEEGGYKATRHLLELGHRDIAHLTGH
LHHQAGRERLLGYKRALLEAGLTWRPELVLDGNFDALHAYRAVRRAWEGGLRFSALFAAS
DEMALGAWAALEDLGLHVPADVSLVGYDDLPEVGERLTTIHQDIPTIAREAVRLLREALQ
RKSPYGKRVPVHLVPRGSTARREVE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggagaccagaaagaagctgacgataaaggaaatcgctaggctcgcaaacgtttccgta
ggtaccgtaagccgagtcctcaatggccggcctggggttagcccggaaacccgggcccgg
gtgttagaggtggttcgtacccagggtttcgttcccaatgccgctgccagggaactagtg
gggcaatccacggccgttggcctccttctggccccaggagtgcggcgctatacaccctac
tttaccctcctgctggaagccctctccgaggaggtgtggcgcctgggtttgcgggtgatg
gaggttgccacggatacccgcggcctgcctttagagaaggcaagggcgtacctcttactg
ggtgctcatgaccacgacccccgtatcgaaaccctacgaaaggacaacgtaccctttgtg
ctcatcggctgttatcccggaaccttctgggtagccccagacgatgaggaggggggctat
aaggccacccgacacctgttagaactgggtcaccgggacattgctcaccttacggggcat
ttacatcaccaggcgggaagggagcggcttcttgggtataagagggcccttctggaagcg
gggctaacgtggcgcccggagctggttctggacggcaactttgatgccctccatgcctac
cgggcggtgaggcgggcatgggaggggggcttgcgtttctcggctctttttgccgcctcc
gacgaaatggccttgggggcctgggctgctttggaggatctgggccttcatgttcctgct
gacgttagcctggtggggtacgacgacctccccgaggtaggggaaaggctcaccaccatc
caccaggacatccctaccatcgcccgcgaagcggtaaggcttctccgggaagctttacag
agaaagagcccatatgggaagcgggtgcctgttcatctggttcccaggggttctacggcg
cgaagggaggtggaatag
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