Thermus scotoductus: TSC_c18220
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Entry
TSC_c18220 CDS
T01414
Symbol
holA
Name
(GenBank) DNA polymerase III, subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
tsc
Thermus scotoductus
Pathway
tsc03030
DNA replication
tsc03430
Mismatch repair
tsc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TSC_c18220 (holA)
03430 Mismatch repair
TSC_c18220 (holA)
03440 Homologous recombination
TSC_c18220 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsc03032
]
TSC_c18220 (holA)
03400 DNA repair and recombination proteins [BR:
tsc03400
]
TSC_c18220 (holA)
Enzymes [BR:
tsc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TSC_c18220 (holA)
DNA replication proteins [BR:
tsc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TSC_c18220 (holA)
DNA repair and recombination proteins [BR:
tsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TSC_c18220 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
GGDEF_2
Hda_lid
DNA_pol3_delt_C
Motif
Other DBs
NCBI-ProteinID:
ADW22436
UniProt:
E8PM17
LinkDB
All DBs
Position
1726271..1727170
Genome browser
AA seq
299 aa
AA seq
DB search
MVIAFTGDPFLAKEALLQEASLRGLTRFTEPTPEALAEVLSPGLFGKAGAMLDLREVSDG
EWKVLKPLLENVPEEVAVLLLDPKPTTARAAFYRTRERRDFPTPKGKDLVRHLENRAKRL
GFRLPAGIAQYLASLEGDLEALERELEKLALLPPPLTLEKVERVVALKPPVSGFDLVRAV
LEGEAKAAFRHLRRLREEGEEPLRLLGAFAWQFSLLARAWMLLKENPRPTEADLARLEAH
PYAAKRALELARGLPKEALEASLDALIQAERRAKEGKDPWLALERAVYTLLHLTPAEPA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggtcatcgccttcacgggggatccctttctggccaaggaggcccttctccaggaggcc
tcccttcggggcctcactcgcttcaccgagcctacgcccgaggccctggcggaggtccta
agccccgggcttttcgggaaagccggggccatgctggacctgagggaggtgagcgacggg
gagtggaaggtgttgaagccccttctggaaaacgtccccgaggaggtggccgtgctcctc
cttgatcccaagcccaccaccgcccgggccgccttctaccgcacccgggagcggcgggac
ttccccaccccgaagggcaaggacctcgtccgccacctggaaaaccgggccaagcggctg
gggttcaggctacccgccggcatcgcccagtacctggcctccctggaaggggacctcgag
gccctggaacgggagctggagaagctcgcccttcttccacctcccctcaccctggagaag
gtggaacgggtggtggccctaaagccccctgtaagcgggtttgacctggtgcgggcggtt
ttggaaggggaggccaaggctgccttccgccacctaaggcggctaagggaggagggagag
gagcccctaaggctacttggggccttcgcctggcagttttcccttctggccagggcctgg
atgcttctcaaggagaaccccaggcccacggaagccgacctcgcccgcctcgaggcccat
ccctacgcggccaagagggcgctggagctggctcgaggcctccccaaggaagccctcgag
gccagcctggacgccttgatccaggcagagcgccgggccaaggagggcaaggatccctgg
ctggccctggaaagggcggtctacaccctcctccacctcaccccggcagaacctgcgtga
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