Thermus scotoductus: TSC_c18530
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Entry
TSC_c18530 CDS
T01414
Name
(GenBank) ribonuclease II family protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
tsc
Thermus scotoductus
Brite
KEGG Orthology (KO) [BR:
tsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsc03016
]
TSC_c18530
Enzymes [BR:
tsc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
TSC_c18530
Transfer RNA biogenesis [BR:
tsc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
TSC_c18530
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GFIT
Motif
Pfam:
RNB
HTH_RNase_II
RNase_II_C_S1
MazE_antitoxin
Motif
Other DBs
NCBI-ProteinID:
ADW22466
UniProt:
E8PMC5
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Position
complement(1756161..1757939)
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AA seq
592 aa
AA seq
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MVVYKGRPALAVEKGDRLELTLPDGARVKVRPKDVLWLHPGPASLELNPPEGEEEAAWEL
LQGQVVDLKDLAELVYGAYTPETAYGAYLLAQRGERFLLEGERVRARTREEVEALLEARR
KREEQERRFQEGVRRLREGVPAPEDRSLIQEVEAMALGERRESRVLRALGFPETPEAAHG
LLLSLGVWRRQNPHPRRLGLILVPPELPLPALPQEKRVDLTHLPAYAIDDEESQDPDDAV
YAERVPEGFQLWVHVADVAALVEPFSPLDQEAMRRGANLYLPEGTVPMLPQEATWVLGLG
LKEVSPALTFRLKVSGEGEILEEEVFPSWVRVRRLSYQEALGVEELAPMRDLALAFRRKR
LAQGGLDLRLPEVKVRLEGQEVRIRPLEAYESRIWVQEAMHLAGYAAAHLALREGLPFPF
ATQEAPARRVEGEGLSAMWEQRKALKRAQLKAVPAPHRGLGLPLYAQVTSPLRRYLDLVA
HQQLRAWLKGEKPLSQEELLQRVGAAEAMADLVREAERKSKLHWILVYLMEKGYEGRGIL
VEKRGGQGIFLLPELGLTAQVALSKPLPLDAEVRLRFLEADLPRLEARFTLL
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
ttggtggtctacaagggaaggcctgctttggcggtggaaaagggggaccgtctggagctc
accctgcccgacggggctcgggtaaaggtgcgtcccaaggatgtcctctggcttcacccc
gggcccgcttccctggagttgaacccgcccgagggcgaggaggaggctgcctgggagctt
cttcagggccaggtggtggatctcaaggacttggccgagctggtctacggggcgtacacg
cccgagaccgcttacggggcctatcttctggcgcaaaggggggagcgcttcctcctggag
ggggaaagggtccgggcccgcacccgggaggaagtggaggccctcctcgaggccaggaga
aagcgggaggaacaggagcggcgcttccaggagggggtaaggcggcttagagaaggggtg
cccgcccccgaggaccgctccttaatccaggaggtggaggccatggccctgggggaaaga
agggaaagccgggtgctcagggccctgggctttccagaaactcctgaggccgcccatggc
cttctcctaagccttggggtgtggcggcggcagaatccccatcccaggcggcttgggctt
atcctcgttcctcctgagcttcccctacctgcccttccccaggaaaagcgggtggacctg
acccacctccccgcctacgccatcgacgacgaggaaagccaggacccggacgacgccgtc
tatgccgaaagggtacccgagggtttccagctttgggtgcatgtggcggatgtggcggcc
ttggtggagccttttagccccctggaccaggaggccatgcgccggggggccaacctgtac
ctgcccgaggggacggtacccatgctgccccaggaggccacctgggttctgggcttgggc
ctgaaggaggtctccccggccctgacctttcgcctcaaggtttccggggaaggggagatc
ctggaggaggaggttttcccaagctgggtaagggtgagaaggctcagctaccaggaggcc
ctgggggtggaggagcttgcccctatgcgggacctggccttggccttccggcggaagcgc
ctggcccaggggggattggacctgcgcctacccgaggtgaaggtgcgcttggagggccag
gaggtaaggatccgtcccctcgaggcctacgaaagccgcatctgggtccaggaggccatg
catctcgcgggttatgccgccgcccacctggcccttagggagggactgcccttccccttc
gccacccaggaggctcccgccaggcgggtggaaggggaggggcttagcgccatgtgggag
caacgcaaggccctgaagagggcccagctcaaggccgtgcccgcaccccacaggggcctg
ggccttcccctctacgcccaggtgacgagccctttaaggcgctacctggacctggtggcc
caccagcagctaagggcctggttgaaaggggagaagcccctttcccaggaggagctcttg
caacgggtgggggcggcggaggccatggccgacctggtgcgggaggcggagaggaagagc
aagctccactggatcctggtttacctgatggagaaggggtacgagggaaggggaatcctg
gtggagaaaaggggagggcaggggattttcctcctgccggagctgggcctgactgcccag
gtggccctcagcaaacccctgcccctggatgctgaggtccgcctccgctttctggaggcg
gacctccctcgcctcgaggcccgcttcacccttctctag
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