Thermus scotoductus: TSC_c18590
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Entry
TSC_c18590 CDS
T01414
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
tsc
Thermus scotoductus
Brite
KEGG Orthology (KO) [BR:
tsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsc03016
]
TSC_c18590 (truD)
Enzymes [BR:
tsc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
TSC_c18590 (truD)
Transfer RNA biogenesis [BR:
tsc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TSC_c18590 (truD)
Prokaryotic type
TSC_c18590 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
DbpA
Motif
Other DBs
NCBI-ProteinID:
ADW22472
UniProt:
E8PMD1
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All DBs
Position
1763664..1764719
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AA seq
351 aa
AA seq
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MDLVFRPGRYPYLTQDLPGVGGMIRLLPQDFQVEEVPAYLPSGEGEHLYFLLEKEGLTTR
QVVEFLRDEVGVPEKEIGVAGLKDKHAQTRQWFSIPRKHEDALCLLENLKGTRLLEANLH
TNKLRTGHLKGNRFRILIRGAHDVERARAILKTLEAKGIPNYYGPQRFGLEGQNPVKGYQ
LVKKGKGRGNPWLKRFLIGSLQSLLFNDWVALRMERGLYDRVIPGDWAKKHATGGEFLVE
REEEAERALRLEISATGPLFGKKYPEAQGKARALEDEILARYDLKREEFRARRGARRPIR
IPLTEWTLEETPEGLWLTFFLPKGSYATSLLREVMKVEVDAPEEEEALGEG
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggacctcgtctttcgccccgggcgctacccctacctcacccaggaccttcccggcgtg
gggggtatgatccgcctccttccccaggacttccaggtggaggaggtgcccgcctacctg
cccagcggggaaggggaacacctctacttcctcctggagaaggaaggcctaaccacccgc
caggtggtggagttcctgcgggacgaggtgggggttccggaaaaggagatcggggtggcg
gggctgaaggacaagcacgcccaaacccggcagtggttctccatcccccgcaaacacgag
gatgccctctgcctgctggaaaaccttaagggaacccggcttctggaagccaacctgcac
accaacaagctgcgcacgggccacctcaagggaaaccgcttccgcattctcattcgtggg
gcccacgatgtggagagagcccgggccatcctgaagaccctcgaggccaagggcattccc
aactactacggcccccagcgctttggcctcgaggggcagaacccggtcaagggctaccag
ctggtgaagaagggtaagggaaggggaaatccctggcttaagcgcttcctgattggaagc
ctgcaaagcctcctcttcaacgactgggtggccctaaggatggaaagggggctttacgac
cgggtcatccccggggactgggccaagaagcacgccaccgggggggagtttctggtggaa
cgggaagaggaggcggaaagggccttgaggctggaaatcagcgccaccgggcccctcttc
ggcaagaagtacccggaggcccaggggaaggccagggccctggaggacgagatcctggcc
cgctatgacctgaagcgggaggagttccgcgcccgccggggggccaggaggcccatccgc
atcccccttacggagtggaccctggaggaaaccccggaagggctttggctgaccttcttc
ctgcccaagggcagctacgccaccagcctcctaagggaggtgatgaaggtggaggtggat
gcaccggaagaggaagaagccctgggggagggctaa
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