Thermus scotoductus: TSC_c22170
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Entry
TSC_c22170 CDS
T01414
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tsc
Thermus scotoductus
Pathway
tsc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tsc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TSC_c22170 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsc03021
]
TSC_c22170 (rpoA)
03400 DNA repair and recombination proteins [BR:
tsc03400
]
TSC_c22170 (rpoA)
Enzymes [BR:
tsc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TSC_c22170 (rpoA)
Transcription machinery [BR:
tsc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TSC_c22170 (rpoA)
DNA repair and recombination proteins [BR:
tsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TSC_c22170 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_5
RNA_pol_L_2
RAD51D_N
HHH_8
Motif
Other DBs
NCBI-ProteinID:
ADW22820
UniProt:
E8PP95
LinkDB
All DBs
Position
complement(2091727..2092668)
Genome browser
AA seq
313 aa
AA seq
DB search
MLESKLKAPVFTVRTQGREYGEFVLEPLERGFGVTLGNPLRRILLSSIPGTAVTSVYIED
VLHEFSTIPGVKEDVVEIILNLKELVVRFLDPKMQTTTLVLKAEGPKVVRAGDFVVPPDA
EILNPDLTIATLDKGGKLYMEVRVDRGVGYVPAERHGIKDRINSIPVDAIFSPVRRVAFQ
VEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVEILKEHLSYFANPQATALPAPEPAS
VERAEGEEDLDLPLEELGLSTRVLHSLKEEGIESVRALLALNLKDLKNIPGIGERSLEEI
REALAKKGFALKE
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgttagagagcaagctgaaagccccggtcttcacggtgcgcacccaggggcgggagtac
ggggagtttgtcctggagcccctggagcggggattcggcgtcaccctgggcaatcccttg
aggcggattctcctttcctccattcccgggaccgcggtcaccagcgtctacattgaggat
gtccttcacgagttctccaccattcctggggtcaaggaggacgtggtggagatcatcctg
aacctcaaggagctggtggtgcgtttcctggaccccaagatgcagaccaccaccttggtc
ctgaaggcggaagggcccaaggtggtcagggcgggggatttcgtggtgccccccgatgcg
gagatcctgaacccggacctcaccatcgccaccttggacaaggggggcaagctttacatg
gaggtgcgggtggatcggggtgtggggtacgtgcccgccgagcgccacggcatcaaggac
cgcatcaactccattcccgtggacgccatcttctcccccgtgcgccgggtggccttccag
gtggaggatacccggcttggccagcgcaccgacctggataagctgaccctgcggatctgg
acggatggctccgtcacccccttggaggccttgaaccaggcggtggagatcctcaaggag
cacctttcctatttcgccaacccccaggccaccgccctgcctgccccggagcctgcctcc
gtggagcgtgcggaaggggaggaagacctggacctgcccctggaggagcttggcctttcc
acccgcgttctccacagcctcaaggaggaggggatcgagtcggtgcgggcgcttttggcc
ttgaacctcaaggaccttaagaacatccccggcatcggggaaaggagcctcgaggagatc
cgcgaggctttggccaaaaagggattcgccctaaaggagtga
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