Entry |
|
Symbol |
gyrB
|
Name |
(GenBank) DNA gyrase, subunit B
|
KO |
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Organism |
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Brite |
KEGG Orthology (KO) [BR:tsc00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:tsc03032]
TSC_c22740 (gyrB)
03400 DNA repair and recombination proteins [BR:tsc03400]
TSC_c22740 (gyrB)
Enzymes [BR:tsc01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
TSC_c22740 (gyrB)
DNA replication proteins [BR:tsc03032]
Prokaryotic type
DNA Topoisomerases
TSC_c22740 (gyrB)
DNA repair and recombination proteins [BR:tsc03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TSC_c22740 (gyrB)
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
2132070..2133977
|
AA seq |
635 aa
MSYDASAIKVLKGLEGVRHRPAMYIGGTGVEGYHHLFKEILDNAVDEALAGYATEIVTTL
NPDGSLTVEDNGRGIPVDLMPEEGKPAVEVIYTTLHSGGKFDSSAYKVSGGLHGVGASVV
NALSEWTVVEVFREGKHHRIAFSRGEVTEPLAVVGPAPKGKTGTRVTFKPDPLIFGNQAF
DPSKIRARLREVSYLVAGLRLVFKDLIHGREDVYLDKGGVASFAKALAEGEELLYEKPFL
LKGQEGEVEVEVGLIHTKGYNAEILTYANMIPTRDGGTHLTAFKSAYSRALNQYAKKAGL
NKEKGPQPTGDDLLEGLYAVVSVKLPQPQFEGQTKGKLLNPEAGSAVSQVVYEKFLEILE
ENPRIAKTIYEKALRAAQAREAARKARELVRRQNPLESDDLPGKLADCQTENPEEAELFI
VEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKAGLSKALKNAEVRAMVAAIGVGIGGTG
DEAHFDLEGLRYHKIIIMTDADVDGSHIRTLLLTFFYRYMRPLIERGHVYIAQPPLYRLQ
VGKKVEYLYSDEELAARLKELEGKSYEVQRFKGLGEMNPEQLWETTMNPEKRVLKKVELQ
DALEASELFEKLMGQEVAPRREFIEEHARYAELDI |
NT seq |
1908 nt +upstreamnt +downstreamnt
gtgagttacgacgcttccgccattaaggtactcaaaggcctagagggggtacgccaccgc
cccgccatgtacatcgggggcacgggggtggaggggtaccaccacctcttcaaggaaatc
ctggacaacgccgtggacgaggccctggcgggctacgccacggagatcgtcaccaccctc
aatcccgatggctccctcaccgtggaggacaacggccggggcatccccgtggacctgatg
cccgaggagggcaagcccgcggtggaggtgatctacaccaccctgcactccgggggcaag
tttgacagcagcgcctacaaggtctcagggggcctccacggggtaggggccagcgtggtg
aacgccctttccgagtggacggtggtggaggtgttccgggagggaaagcaccaccggatc
gccttcagccggggcgaggtcaccgaaccccttgccgtggtggggcccgctcccaagggc
aagaccggcacccgggtcaccttcaagcccgatcccctcatcttcgggaaccaggccttt
gaccccagcaagatcagggcccgcctgcgggaggtgagctacctggtggcggggcttagg
ctggtcttcaaggacctaatccacgggcgggaggacgtctacctggacaaagggggggtg
gcctccttcgccaaggccctggcggaaggggaggagcttctttacgaaaagcccttcctc
ctcaaggggcaggagggggaggtggaggtggaggtgggcctcatccacaccaaggggtac
aacgccgagatcctcacctacgccaacatgatccccacccgggacggcggtacccacctc
accgcctttaagagcgcctacagccgggccctgaaccagtacgccaagaaggcgggccta
aacaaggaaaaaggcccccagcccaccggggacgaccttctggaggggctttatgccgtg
gtaagcgtgaagctaccccaaccccagttcgaaggtcagaccaaggggaagcttttaaac
cccgaggcggggagcgccgtaagccaggtggtctacgagaagtttttggaaatcctcgag
gagaacccccgcatcgccaagaccatctacgagaaggccctgcgggccgcccaagcccgg
gaggccgcccggaaggcccgggagctggtgcgtcggcaaaaccccctggagtccgacgac
cttcccgggaagctggccgactgccagacggaaaacccggaggaagcggagcttttcatc
gtggagggggattcggccgggggaagcgccaagcagggccgcgaccggcgcttccaggcc
atcctgccccttaggggcaagattctcaacgtggaaaaggcggggctttccaaggccctg
aaaaacgccgaggtgcgggccatggtggcggccatcggggtggggatcgggggtacgggc
gacgaagcccactttgacctcgagggcctccgctaccacaagatcatcatcatgaccgac
gccgacgtggatggaagccacatccgcaccctcctcctcaccttcttctaccgctacatg
cggcccctgatcgaaagggggcacgtgtacattgcccagccgcccctttaccgcctgcag
gtggggaaaaaggtggaatacctctactccgacgaggagcttgccgcccgcctgaaggag
ctggaggggaaaagctacgaggtgcagcgctttaagggtctcggggagatgaaccccgag
cagctttgggaaaccaccatgaacccggagaagcgggttttgaagaaggtggagctccag
gacgccctcgaggccagcgagctcttcgagaagctcatgggacaggaagtagcccccagg
agggagttcatcgaggagcacgcccgctacgcggagctggacatctga |