Tritonibacter scottomollicae: R1T40_02140
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Entry
R1T40_02140 CDS
T09466
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tsco
Tritonibacter scottomollicae
Pathway
tsco03420
Nucleotide excision repair
tsco03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tsco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
R1T40_02140
03430 Mismatch repair
R1T40_02140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsco03400
]
R1T40_02140
Enzymes [BR:
tsco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R1T40_02140
DNA repair and recombination proteins [BR:
tsco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
R1T40_02140
MMR (mismatch excision repair)
Other MMR factors
R1T40_02140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
WOI33571
LinkDB
All DBs
Position
302201..304657
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AA seq
818 aa
AA seq
DB search
MSSFDEMDAFEGASLSARAMAARPTPYMDGLNPAQREAVETLDGPVLMLAGAGTGKTKAL
TTRIVHLLSTNKARTNEILAVTFTNKAAREMKERVGRMLGQPAEGMPWLGTFHSICVKLL
RRHAELVGLKSNFSILDTDDQIRLMKQLIQAAGIDDKRWPARMLANIIDDWKNRALTPEK
VPASDASAYNYRGTEFYAQYQARLKELNAVDFGDLLLHVVEIFQNNPDLLAQYHRWFRYI
LVDEYQDTNVAQYLWLRLLASGHKNICCVGDDDQSIYGWRGAEVGNILRFEKDFSGAKVI
RLEQNYRSTAHILAAASGVIRGNEGRLGKELWTEADGGEKVRLIGHWDGEEEARWIGEEI
EAMQRGSRGIRPIDLNEMAILVRASHQMRAFEDRFLTIGLPYRVIGGPRFYERLEIRDAM
AYFRVVISPDDDLAFERIVNTPKRGLGDKAQQKMQMIARENGVSLLEGARIAVEEGHIKG
KGGAALRRLVEDIARWGRMTRVVAPPQGPEDAVLEATSFDAFTSGEPEVPHVELAEIILD
ESGYTTMWQNDKTPEAPGRLENLKELVKALENFENLQGFLEHVSLVMDNDKQDAEQKVSI
MTLHAAKGLEFPAVFLPGWEDGLFPSQRSMDESGLKGLEEERRLAYVGITRAEEVCTISF
AGNRRVFGQWQSQLPSRFVDELPEEHVEVLTPPGLYGGGYGAAAPGAARGFGETANEYGR
STIEERMANADGYNSPGWKRMQARAGEHGLSKPRESKTQVIDLTATSAFTMGERVFHQKF
GYGAVIGIEGDKLEVDFEKAGTKKVVARFVSASDDVPF
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtttcgacgaaatggacgccttcgagggcgcatcgctatccgcccgcgccatg
gccgcgcggcccacgccctatatggacgggttgaaccccgcgcaacgcgaggcggtagag
acattggacggcccggtattgatgctggctggcgccggcaccggcaagaccaaggcgctg
accacgcgcatcgtgcatctgctcagcaccaacaaggcgcgcaccaatgaaatcctcgcg
gtgaccttcaccaacaaggccgcccgcgagatgaaggagcgggtgggccggatgctgggc
caaccggccgagggcatgccctggctcggcacctttcactccatctgcgtcaagctgctg
cgccgccatgcggaactggtggggctgaaatcgaatttctccattttggacaccgacgac
cagatccgcctgatgaagcagctcatccaggccgccggcatcgacgacaagcgctggccg
gcccggatgctggccaacatcatcgacgactggaagaaccgcgcactgaccccggagaag
gtgcccgccagcgacgccagcgcctacaactatcggggcaccgaattctacgcccagtat
caggcccgcctgaaggagctgaatgcggtcgattttggcgatctgttgctgcatgtggtg
gagatcttccagaacaacccggatttgctggcgcagtatcatcgctggttccgctacatc
ctggtggacgagtatcaggataccaacgtcgctcagtatctctggctgcgactgctggcc
tcggggcacaagaacatctgctgcgtcggggatgacgaccagtcgatctacggctggcgc
ggtgccgaggtgggcaatatcctgcggtttgaaaaggatttttctggcgccaaggtgatc
cggctggagcagaactaccgctccaccgcccatattctggcggcggcatctggcgtcatt
cgcggcaatgaggggcgtctgggcaaggagctgtggaccgaggccgacggcggcgaaaag
gtccgcctgatcggtcattgggacggcgaggaagaggcccgctggatcggcgaggaaatc
gaggcgatgcagcgcggcagtcgcggcatccgccccatcgacctcaacgagatggccatc
ctggtgcgtgcctcgcatcagatgcgcgccttcgaggaccgtttcctgaccatcggtctg
ccttatcgcgtcatcggcggcccgcgtttctatgaacgtttggaaatccgtgatgccatg
gcttatttccgtgtggtgatctcacccgacgatgatctggcctttgaacgcatcgtcaac
acgcccaaacgcggccttggcgacaaggcgcagcagaaaatgcagatgatcgcccgcgaa
aacggcgtgtccctgctggagggcgcccggatcgcggtggaagagggccacatcaagggc
aagggcggcgcggccctgcgccgtctggtcgaggatatcgcccgctggggccgcatgacc
cgcgtggtggcgccgccccagggtccggaagacgcggtgctggaggccaccagctttgac
gccttcacctctggggagccggaggttccgcatgtggaactggccgagatcatcctggat
gagagcggctacaccaccatgtggcagaacgacaagacgccggaggccccgggccgcctt
gaaaacctcaaggaactggtcaaggcgctggaaaacttcgagaacctgcagggcttcctc
gaacatgtcagcctggtgatggacaacgacaagcaggatgcggagcagaaggtctccatc
atgaccctgcacgcggccaaggggctggagtttccggcggtgttcctgccgggctgggag
gacggcctgtttccctcgcagcgctcgatggatgaaagcggcctcaaggggctcgaggaa
gaacgtcgcctggcctatgtgggtatcacccgggccgaggaggtctgcaccatttccttt
gccggaaaccgccgggtgtttggccaatggcagtcgcagctgccgtcacgattcgtcgac
gagctgcccgaagagcatgtggaggtgctgacgccaccggggctctatggcgggggctac
ggcgcggcggcgccgggcgcggcgcgtggttttggtgagacggccaatgaatacggccgc
tccaccatcgaggagcggatggccaatgcagatggctataattctccgggttggaaacgc
atgcaggcgcgggctggcgaacatgggctgagcaaaccccgcgagagcaagacccaggtg
atcgacctgacggccacctctgccttcaccatgggcgagcgggtgttccaccagaagttc
ggctatggcgcggtcatcgggatcgagggtgacaagctggaagtggatttcgagaaggcc
gggaccaagaaagtggtagctcgctttgtttcggccagcgacgacgtgccgttctga
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