Tritonibacter scottomollicae: R1T40_04290
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Entry
R1T40_04290 CDS
T09466
Symbol
lptD
Name
(GenBank) LPS assembly protein LptD
KO
K04744
LPS-assembly protein
Organism
tsco
Tritonibacter scottomollicae
Brite
KEGG Orthology (KO) [BR:
tsco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsco02000
]
R1T40_04290 (lptD)
Transporters [BR:
tsco02000
]
Other transporters
Pores ion channels [TC:
1
]
R1T40_04290 (lptD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptD
LptD_N
Porin_3
Motif
Other DBs
NCBI-ProteinID:
WOI33970
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All DBs
Position
complement(778444..780642)
Genome browser
AA seq
732 aa
AA seq
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MPKTVNFKNWKRGALLSTVVPLWLGLSAISAASQTAVPQGESIDTPAMLVADRVFVSPDR
KLVAEGNVEAFQGDVRLQARRITYDRQTGLLKMEGPIRIDQSGSITVLATAAELDSGLRN
GILRGARMVFDQQVQLAALQMTRVEGRYSQLYKTAVTSCDVCSDGSAPLWQIRAERITHD
QTERQLYFEGAQLLIKDVPVFYFPALRLPDPTLERADGFLTPSLFSSSNLGVGLKLPYFV
TIGPDKDLTITPYLAGKTTTLELRYRQAFRTGNIEISGAFSRDDIQPDDGRGFLSAAGRF
DIWRDFKLEFDLNTVSDDAYLADYDISDTDRIRSELSISRVRRDQLIQGNIYNYKTLRDT
ENQDFIPSTILTGTFEHRLFPKHIGGEVRLKLNATQFTRKSSLDATATDPNGRDVTRVSA
DVIWLRSWILPYGVETNWTVGLGLDSFALSDDGAFDNDATRVTPKTALTFRRPMTRQTAS
GAVQVLEPILQVGWTDVNGDDTPNEASNISEYDQGNLLALSRFPETDAREDGKTLIYGVN
FSHFDTSGWYATGTIAQIRRDEAQPGFTLSSGLDGQNSNLLVAGQIGLRNNLTLTARSIF
DEEWSVSKAEFRGDLNRDRVSLAGSYLWLQADPAENRAQETSELWFDGSYALNQTWRAGA
NMRYDITDGRATRAGLGLSYRNECVTLDLSVSRRYTSTTSVEPSTDFGFTLSLNGFSVKS
GNTTSRRSCSKT
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagacggttaatttcaagaactggaagcgaggagcgctgctgagcactgtggtt
cccctgtggctgggcctctcggccatcagcgcagcctcccagacggctgtgccgcaaggc
gaaagcattgacaccccggccatgctggttgcggacagggtttttgtatcgcctgaccgc
aaactggtggcggaaggcaacgtcgaggcctttcagggtgatgtgcgcctgcaggccaga
cgcatcacctatgaccgccaaacaggtctgttgaagatggaaggcccgatccgcatcgac
cagagcggatcaattactgtcctcgcgacagcagcggaattggacagtggattgcgcaac
ggcattctgcgcggtgcccgcatggtctttgaccaacaggtgcaactcgctgccctgcag
atgacgcgcgtcgaaggacgctactcacagctgtacaagaccgctgtcacgtcctgcgat
gtgtgcagcgatggcagtgcgccgctctggcagatccgggcagagcggatcacccatgac
cagacggaacgccagctttactttgaaggggcgcaattgctgatcaaggacgttccggtg
ttctattttccggcactgcgtctgcccgacccgacactggaacgtgcggacggatttcta
acgccttcgctgttcagctcttccaacctcggcgtaggtctcaaactgccgtatttcgtc
accatcggtcccgacaaggatctgaccatcacgccgtatctggctggcaagacgacaacc
ctggaactgcggtatcggcaggccttccgcacaggcaacatcgagatttccggcgccttc
agccgcgatgacattcaacccgatgacgggcgcggtttcctgtctgcagcgggccggttc
gatatctggcgtgacttcaagcttgaatttgacctcaacaccgtctccgacgacgcctat
ctcgccgactatgatatttccgacactgaccgcatacgctcggaactgagcatcagcagg
gtgcggcgcgatcagctcattcaggggaatatctacaactacaagacacttcgggacaca
gagaaccaggatttcattccctcgaccatcctgaccggcaccttcgaacaccgactgttt
cccaagcatatcggcggtgaggttcgactaaagttgaacgccactcagttcacccgcaaa
tcctcgcttgatgccaccgcgacggatcccaacggtcgcgacgtgacgcgggtgtcggcg
gacgtgatctggttgcgcagttggattttgccttatggcgtcgaaaccaactggaccgtt
ggtctggggctggacagctttgcgctttcagacgatggcgcatttgacaatgacgccacg
cgcgtgacccccaaaactgcgctgacgttccgccggcccatgacccggcaaacggcctcc
ggcgcggttcaggttctagagccgatccttcaggtcggctggaccgacgtgaacggcgac
gacaccccgaatgaagccagcaatatttccgaatacgatcagggcaacctgctggcgctg
tcgcgctttcctgagacggacgcgcgcgaagacggcaagacgctgatctacggggtgaac
ttttcccatttcgacacgtcgggttggtatgccaccggcacgatcgcgcaaattcgccgg
gacgaggcgcagcctggctttacgctctcgtctggtctcgatggtcagaactccaacctt
ctggtcgccgggcagattggcttgcgcaacaacctgaccctgaccgcccgaagcattttt
gatgaggaatggtcggtgtccaaggccgaattccgcggcgacctcaatcgcgaccgggtg
tctcttgctggcagctatctctggctgcaggctgatcctgccgagaacagagcgcaggag
acctcagagctgtggtttgatggatcttacgcgctgaaccagacctggcgtgccggagcg
aacatgcgctacgacataaccgatggccgcgccacacgcgcaggtctcggcctgagctac
cgaaacgaatgtgtcaccctcgacctctcggtcagccggcgctataccagcacgacaagt
gttgagccttcgaccgatttcggatttacactatcgctcaacgggttctccgtgaagagc
ggcaacacaacgagcaggcgatcatgcagcaagacctaa
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