Tritonibacter scottomollicae: R1T40_09425
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Entry
R1T40_09425 CDS
T09466
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tsco
Tritonibacter scottomollicae
Pathway
tsco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tsco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R1T40_09425 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsco03019
]
R1T40_09425 (groL)
03110 Chaperones and folding catalysts [BR:
tsco03110
]
R1T40_09425 (groL)
03029 Mitochondrial biogenesis [BR:
tsco03029
]
R1T40_09425 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tsco04147
]
R1T40_09425 (groL)
Enzymes [BR:
tsco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
R1T40_09425 (groL)
Messenger RNA biogenesis [BR:
tsco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
R1T40_09425 (groL)
Chaperones and folding catalysts [BR:
tsco03110
]
Heat shock proteins
HSP60 / Chaperonin
R1T40_09425 (groL)
Mitochondrial biogenesis [BR:
tsco03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
R1T40_09425 (groL)
Exosome [BR:
tsco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
R1T40_09425 (groL)
Exosomal proteins of other body fluids (saliva and urine)
R1T40_09425 (groL)
Exosomal proteins of breast cancer cells
R1T40_09425 (groL)
Exosomal proteins of colorectal cancer cells
R1T40_09425 (groL)
Exosomal proteins of bladder cancer cells
R1T40_09425 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
ChlI
Knl1_RWD_C
Motif
Other DBs
NCBI-ProteinID:
WOI34923
UniProt:
A0A2T1AL28
LinkDB
All DBs
Position
complement(1832077..1833729)
Genome browser
AA seq
550 aa
AA seq
DB search
MAAKDVKFDTDARNRMLKGVNTLADAVKVTLGPKGRNVVLEKSFGSPRITKDGVSVAKEI
ELEDKFENMGAQMVKEVASRTNDEAGDGTTTATVLAQAIVKEGLKQVAAGLNPMDLKRGI
DMATTKVVAAIKEMARPVNDSAEVAQVGTISANGEAEIGRQIADAMQKVGNEGVITVEEN
KGMETETDVVEGMQFDRGYLSPYFVTNADKMTAELDDCMILLHEKKLSSLQPMVPLLEQV
IQSQKPLLIIAEDVEGEALATLVVNKLRGGLKISAVKAPGFGDRRKAMLQDIAILTGGQV
ISEDLGMKLESVTMDMLGTAKKVQITKDETTIVDGAGEKAEIEARVAQIRNQIEETTSDY
DKEKLQERVAKLAGGVAVIRVGGMTETEVKERKDRVDDALNATRAAVQEGVIVGGGVALV
QGGKALEGLTGENSDQNAGIAIVRRALEAPLRQIAENAGVDGAVVAGKIRESDDKTFGYN
AQTGEYGDMFSYGVIDPAKVTRTALEDAASIAGLLITTEAMVADKPAKEGAAAGGGMPDM
GGMGGMGGMM
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaggacgtcaaattcgacaccgatgcccgcaaccgtatgctgaagggtgtc
aacaccctcgcagacgctgtcaaagtaaccctgggccccaaaggccgtaacgtggttctg
gagaaatccttcggctccccgcgcatcaccaaagacggtgtgtccgtggcgaaggaaatc
gaactggaagacaagttcgagaacatgggcgcccagatggtgaaggaagttgcttcccgt
accaacgacgaagcaggcgacggcaccaccaccgcaaccgtgctggcgcaggccatcgtc
aaagaaggcctgaagcaggttgctgctggcctgaacccgatggacctgaagcgcggcatc
gacatggcgaccacgaaagtcgtcgcagcgatcaaagagatggcccgtccggtcaacgat
tccgctgaagttgcgcaggttggcaccatctccgccaacggcgaagccgagatcggccgt
cagatcgcagacgcgatgcagaaagtcggcaacgagggtgtcatcaccgtcgaagagaac
aaaggcatggaaaccgagaccgacgtggtcgagggcatgcagttcgaccgcggctacctg
tccccctacttcgtgaccaacgctgacaagatgactgcagaactcgacgactgcatgatc
ctgctgcacgagaagaaactctcctccctgcagccgatggttccgctgctggagcaggtg
atccagtcgcagaagcctctgctgatcattgcagaagacgtcgaaggcgaagcgctggca
accctggttgtcaacaagctgcgcggcggcctgaagatctctgctgtcaaggcaccgggc
tttggcgaccgtcgcaaggccatgctgcaggacatcgcgatcctgaccggcggccaggtg
atctccgaagacctcggcatgaagctcgagtccgtgaccatggacatgcttggcaccgcc
aagaaggttcagatcaccaaggacgagaccaccatcgttgacggtgcaggcgagaaggcc
gagatcgaagcacgtgttgctcagatccgtaaccagatcgaagagaccacctccgactac
gacaaagagaagctgcaagagcgcgttgccaaactggcaggcggtgttgccgtgatccgc
gtcggtggcatgaccgaaaccgaagtgaaagagcgcaaggaccgtgtggacgatgctctg
aacgcgacccgcgctgctgtgcaggaaggcgtgatcgtcggtggcggtgttgctctggtt
cagggcggcaaggctctcgaaggtctgaccggtgagaactccgatcagaacgccggtatc
gcaatcgtgcgtcgcgctctcgaagcgccgctgcgccagatcgccgaaaacgccggtgtt
gacggtgccgtggttgccggcaagatccgcgaatccgacgacaagaccttcggttacaac
gctcagaccggcgaatatggcgacatgttctcctacggtgtgatcgacccggccaaagtg
acccggaccgctctggaagatgcggcctcgatcgctggcctgctgatcaccaccgaagcc
atggttgccgacaagcccgccaaagaaggcgcagctgccggtggcggcatgcccgacatg
ggcggcatgggcggcatgggcggcatgatgtaa
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