Tritonibacter scottomollicae: R1T40_10410
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Entry
R1T40_10410 CDS
T09466
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tsco
Tritonibacter scottomollicae
Pathway
tsco03410
Base excision repair
tsco03430
Mismatch repair
tsco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
R1T40_10410 (recJ)
03430 Mismatch repair
R1T40_10410 (recJ)
03440 Homologous recombination
R1T40_10410 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsco03400
]
R1T40_10410 (recJ)
DNA repair and recombination proteins [BR:
tsco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
R1T40_10410 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
R1T40_10410 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
R1T40_10410 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Prok-RING_1
Motif
Other DBs
NCBI-ProteinID:
WOI35111
UniProt:
A0ABZ0HKX0
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All DBs
Position
2034875..2036617
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AA seq
580 aa
AA seq
DB search
MSFLGVETSLTGRCWLGPGVDQSRAGEHLAQETGLPAAVCQVLARRGVPAHEATGFLTPQ
LKELLPDPRRMKDMETAAARFLQAVERRERIAIFADYDVDGGSSAALLMVYLRQMGQQAT
LYIPDRIDEGYGPNDAAMAGLARDHDLIVCVDCGTLSHGPIAAAKGADVVVLDHHLGGET
LPDCVAVVNPNRQDEDGDLGYFCAAGVVFLMLVEVRRQAREKGLGAGPDLMAMLDLVALA
TVADVAPLIGANRALVRQGLKVMGQRQRPGLVALADVSRMDSAPSTYHLGFLLGPRVNAG
GRIGKADLGARLLSTENPHEAAALAERLDQLNTERRDIENAVRAAALEQAEERGFDAPLV
WAAGEGWHPGVVGIVASRLKEATGRPAIVIGLDGDEGKGSGRSVSGIDLGASIQRVAMEG
LLLKGGGHKMAAGLTVARDQLEPAMARLAELLEKQGAGDLGPSDLKLDGMLMPGAATVDL
IEQIEKAGPFGAGAPAPRYGFPDMAVRFAKRVGESHLKVSFTDGMGGNIDAIAFGAFDTA
LGPRLLEHGGARFHVAGRLEVNTWGGRQSAQLRLEDAAEA
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
ttgagttttctgggtgtcgagacctctctgaccgggcgctgctggctgggccccggcgtc
gatcaatcccgcgcgggtgagcatctggcgcaagaaaccggcctgcccgccgccgtctgc
caggtgctggcacggcgcggggtgcccgcgcatgaggccaccgggttcctgacgccgcaa
ctgaaggagctgctgccggatccacgtcggatgaaggacatggagaccgctgccgcacgt
ttcctgcaggcggtggaacggcgcgagcggattgcgatctttgccgattatgacgtggat
ggcgggtcgtcggcggcgctgctgatggtctatctgcggcagatggggcagcaggcgacg
ctgtatattccagaccggatcgacgagggctatggtcccaatgacgccgccatggccggt
ctggcgcgcgatcacgacctgattgtctgcgtcgactgcggcacgctctcgcacgggccg
atcgccgcggccaagggcgcggatgtggtggtgctagaccaccacctcggcggcgagacc
ctgcccgactgcgtggcggtggtgaacccgaaccggcaggacgaggatggcgatctgggc
tatttctgcgctgccggcgtggtgttcctgatgctggtcgaggtgcgccgtcaggcccgc
gaaaagggtcttggcgcagggccggacctgatggcgatgttggatctggtggccttggcg
accgtggctgatgtggcgccgctgatcggcgccaaccgggcgttggtacgtcaggggctg
aaggtaatgggacagcgccagcgccccgggctggtggcgctggcggatgtgagccggatg
gattcggcgccctcgacctatcacctcgggttcctgctgggcccgcgcgtcaacgccggc
ggacggatcggcaaggcggatctcggtgcgcgactgttgtcgacggagaacccgcatgag
gccgccgcgctggccgaacggctggatcagctcaacaccgagcgccgcgacattgaaaac
gccgtgcgcgctgccgccctggaacaggccgaggagcgtggctttgacgcgccgctggtc
tgggcggcgggcgaaggctggcatccgggcgtggtcggcatcgtcgcctcgcgcctgaag
gaggccacaggtcgccccgccattgtcatcggccttgatggcgatgagggcaagggctct
ggccgctcggtgtccggcatcgaccttggcgcctcgatccagcgggtggcgatggaaggg
ctgttgctgaagggcggcggccacaagatggcggcagggctgaccgtggcgcgcgaccag
ttggaaccagccatggcgcggctggcggagctgttggagaaacagggcgcgggagacctc
gggccctccgatctgaagctcgacggcatgctgatgccgggcgcggccaccgtggatctg
atcgaacagatcgaaaaggccggaccctttggcgctggcgcccctgccccgcgctacggc
tttcccgacatggcggtgagattcgccaaacgggtgggcgaatcgcatctcaaggtcagc
tttaccgatggcatgggcggcaatatcgacgccatcgcctttggggcctttgacaccgcg
ctggggccgcgcctgctggagcatggtggcgcgcggtttcatgtggccggacggctggag
gtgaacacctggggtggccgccagagcgcgcaactgcggttggaggacgccgccgaggcc
tga
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