Tritonibacter scottomollicae: R1T40_12085
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Entry
R1T40_12085 CDS
T09466
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
tsco
Tritonibacter scottomollicae
Brite
KEGG Orthology (KO) [BR:
tsco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsco03032
]
R1T40_12085 (ihfB)
03036 Chromosome and associated proteins [BR:
tsco03036
]
R1T40_12085 (ihfB)
03400 DNA repair and recombination proteins [BR:
tsco03400
]
R1T40_12085 (ihfB)
DNA replication proteins [BR:
tsco03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
R1T40_12085 (ihfB)
Chromosome and associated proteins [BR:
tsco03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
R1T40_12085 (ihfB)
DNA repair and recombination proteins [BR:
tsco03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
R1T40_12085 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
WOI31705
UniProt:
A0A2T1ANK7
LinkDB
All DBs
Position
complement(2408422..2408709)
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AA seq
95 aa
AA seq
DB search
MIRSELIQKIADENPHLYQRDVERIVNTVFEEVTTAMSRGDRVELRGFGAFSVKKRDSRV
GRNPRTGETVHVEEKHVPFFKTGKLLRDRLNGKEE
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgatccgttcggaactgatccagaagattgcagacgagaacccgcacctgtatcagcgg
gatgtggagcggatcgtcaacacggtctttgaagaggtcaccaccgccatgtcgcgtggg
gatcgggttgaactcagggggttcggcgccttctcggtgaagaagcgcgactcgcgcgtg
ggccgcaacccccgcaccggagagacggtccatgtggaggagaagcacgtgccgttcttc
aagacgggcaagctgctccgggatcgattgaacggaaaagaagagtaa
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