KEGG   Tritonibacter scottomollicae: R1T40_12835
Entry
R1T40_12835       CDS       T09466                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
tsco  Tritonibacter scottomollicae
Pathway
tsco00300  Lysine biosynthesis
tsco00470  D-Amino acid metabolism
tsco01100  Metabolic pathways
tsco01110  Biosynthesis of secondary metabolites
tsco01120  Microbial metabolism in diverse environments
tsco01230  Biosynthesis of amino acids
Module
tsco_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:tsco00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    R1T40_12835 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    R1T40_12835 (lysA)
Enzymes [BR:tsco01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     R1T40_12835 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: WOI31850
LinkDB
Position
complement(2563412..2564677)
AA seq 421 aa
MDHFLYRDGVLHAEDVPVAEIAATVGTPFYVYSTATLLRHFRLFDEALEGTDHLVCYAMK
AASNQAILKTLAEAGAGMDVVSEGEYRRAKAAGVPGDKIVFSGVGKTADEIRYALSGGIR
QFNVESEPEMEVINAVALELGTTAPITVRVNPDVDAKTHAKIATGKSENKFGIPIARARE
VYAHAASLPGLEVIGIDVHIGSQLTDLDPFRLAYQKVAELTQALREDGHDIRRLDLGGGL
GIPYTRSNEAPPLPVEYGQMIREELGHLNCEIEIEPGRLIAGNAGLMVSKVIYVKHGEGR
DFLILDGAMNDLIRPAMYEAYHDIVPVTEATPGVEPQPYDIVGPVCESGDTFAKARLMPP
LEAGDMVAFRSAGAYGAVMSSEYNSRPLIPEVLVHGDQFAVIRQRPTFDDMINRDTIPEW
L
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggatcattttctctatcgcgatggcgttttgcacgccgaagatgtccccgtagccgag
attgccgctacggtgggcacgccgttctacgtctattccaccgcgacgttgctgcgccat
ttccgcctgttcgatgaggcattggagggcaccgaccatctggtctgctacgcgatgaag
gcggcctccaatcaggccatcctgaagacgctggccgaggcgggcgcgggcatggatgtg
gtgagcgagggcgaataccgtcgcgccaaagccgcaggcgtgccgggcgacaagatcgtc
ttttccggtgttggcaagacggctgacgaaatccgctacgcgctgagcggcggcatccgc
cagttcaacgtcgagtccgagccggagatggaggtgatcaacgccgtcgcattggagctg
ggaacgaccgcgccgatcaccgtgcgggtgaacccggatgtggacgccaagacccacgcc
aagattgcgaccggcaagtccgagaacaaattcggcatccccattgcgcgcgcccgcgag
gtctacgcccatgccgccagcctgccggggcttgaggtcatcgggatcgacgttcacatc
ggctctcagctcacggatctcgacccgttccgccttgcctatcaaaaggttgcggagctg
acgcaggccttgcgcgaggatggccacgacatccgccgtctcgatcttgggggcgggctg
ggcattccctacacgcgatcaaatgaggccccgccgctgccggtcgaatacggccagatg
atcagggaagagctgggccatctgaactgcgagatcgaaatcgagccgggacggctgatt
gccggcaatgcgggtttgatggtgtccaaggtgatctacgtgaaacacggcgaaggtcgc
gatttcctgatcctcgacggtgcgatgaatgacctgatccgccccgcgatgtacgaggcc
taccacgatattgtgcccgtcaccgaagccacgcccggcgttgagccgcagccttatgat
atcgtcggtccggtctgcgaaagcggcgacacctttgccaaggcgcggcttatgccgcca
ttggaagcgggggatatggtcgcctttcgcagtgccggggcctatggcgcggtgatgtcg
agcgagtataactcccgcccgctgatccccgaggttctggtgcatggcgatcaatttgca
gtcattcggcaacgcccgacctttgacgacatgataaatcgcgataccatcccggagtgg
ctctga

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