Tritonibacter scottomollicae: R1T40_14175
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Entry
R1T40_14175 CDS
T09466
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tsco
Tritonibacter scottomollicae
Pathway
tsco03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tsco00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
R1T40_14175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsco03021
]
R1T40_14175
03400 DNA repair and recombination proteins [BR:
tsco03400
]
R1T40_14175
Enzymes [BR:
tsco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
R1T40_14175
Transcription machinery [BR:
tsco03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
R1T40_14175
DNA repair and recombination proteins [BR:
tsco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
R1T40_14175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Glyco_hydro_65C
Motif
Other DBs
NCBI-ProteinID:
WOI32100
LinkDB
All DBs
Position
complement(2833210..2834226)
Genome browser
AA seq
338 aa
AA seq
DB search
MIHKNWAELIKPTQLEVKPGNDPARQATLVAEPLERGFGLTLGNALRRILMSSLQGAAIT
SVQIDNVLHEFSSVAGVREDVTDIILNLKQVSLRMEVEGPKRLSINAKGPAVVTAGDIAE
TAGIEVLNREHVICHLDDGADLFMELTVNTGKGYVSADKNKPEDAPIGLIPIDAIYSPVK
KVSYDVQPTREGQVLDYDKLTLKVDTDGSITPEDALAFAARILQDQLSIFVNFDEPESAG
RQDEDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEDWPPDNIEELAKKFEDSF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccataagaattgggccgaattgatcaagcccacacagcttgaggtcaagccgggc
aatgatccggcacgccaggcgactctcgtggcggaaccgctggagcgtggctttggcctg
acgctcggcaacgcgctgcgccgtattttgatgagctcgctgcaaggtgcggccatcact
tccgttcagatcgacaacgtgctgcacgagttttcctccgtggccggtgtgcgtgaagac
gtcacagacatcatcctgaacctcaagcaggtttccctgcgcatggaagtcgaagggccc
aagcgcctgtcgatcaatgccaaaggtccggcagtcgtcaccgcaggcgacattgccgaa
accgctggcatcgaggttctgaaccgcgagcatgtcatctgccaccttgacgatggtgcg
gatctgttcatggaactgaccgtcaacaccggcaaaggctatgtctctgccgataagaac
aagcccgaggacgcgccgatcggtctgatcccgatcgatgcaatctattccccggtcaag
aaggtctcctacgacgtgcagcccacccgtgagggccaggtgctggactatgacaagctg
accctcaaagttgacaccgacggctccatcacgcccgaggatgcgctggctttcgcagcc
cgcatcctgcaggaccagctctcgatcttcgtgaacttcgacgagccggaatccgcaggc
cgtcaggacgaggacgatggtctcgagttcaacccgcttctgctgaagaaagtggacgag
ctggaactgtccgtgcgttcggcaaactgcctgaagaacgacaacatcgtctatatcggc
gatctgatccagaagaccgaagccgagatgctccgcaccccgaacttcggccgcaagtcc
ttgaacgagatcaaggaagtgctgtctggcatgggtctgcacctcggtatggatgtcgag
gactggccgccggacaacatcgaagagctggccaagaaattcgaagacagcttctga
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