Tritonibacter scottomollicae: R1T40_16860
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Entry
R1T40_16860 CDS
T09466
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
tsco
Tritonibacter scottomollicae
Pathway
tsco00300
Lysine biosynthesis
tsco00470
D-Amino acid metabolism
tsco01100
Metabolic pathways
tsco01110
Biosynthesis of secondary metabolites
tsco01120
Microbial metabolism in diverse environments
tsco01230
Biosynthesis of amino acids
Module
tsco_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tsco00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
R1T40_16860 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
R1T40_16860 (dapF)
Enzymes [BR:
tsco01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
R1T40_16860 (dapF)
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Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
WOI35287
UniProt:
A0ABZ0HLT5
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All DBs
Position
3386785..3387612
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AA seq
275 aa
AA seq
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MLPFMKMHGLGNDFVVVDARANKFEVTPALAKGIAHRQFGLGFDQLAVISAGEAGSASDA
HLTFYNADGSTSAACGNATRCIARFLMDESQKDALHLTTDRGDLMAQDAGEGLTSVNMGP
PQLEWDEIPLAEAMDTLELPIEGAPTATGMGNPHCTFFVENAELIPLEDFGPRYEYHPLY
PQRTNVQVAHVAGPDHIRMRVWERGVGVTLASGSSSCATAVAAARRGLTGRKVRIDLDGG
TLWIDWRADGVWMTGPTMHVADGAFTRQFLESLAS
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgttgccgttcatgaaaatgcatgggctcggaaacgactttgttgttgtcgacgcccgc
gccaataaattcgaagtgacacccgccttggccaagggaatcgcccatcgccagttcggc
ctcggcttcgaccagcttgccgtgatctccgcgggggaggcgggcagtgcgtccgatgcg
catctcactttctacaacgcagatggctccacctcggcggcctgcggcaatgccacccga
tgtatcgcgcgcttcctgatggatgagagtcaaaaggacgcgctgcatctgaccaccgat
cgcggtgatctgatggcacaggatgcgggcgaggggctgacttcagtcaatatggggccg
ccgcaactggagtgggacgagatcccgctggccgaggccatggacacgctggagctgcca
atcgaaggcgcgcccacggccactggcatgggcaaccctcattgcaccttctttgtcgag
aatgcggagttgatcccgcttgaggacttcgggccgcgttacgaataccacccgctctac
ccacaacgcaccaatgtgcaggtggcccatgtggcgggtcctgatcacatccgcatgcgc
gtctgggagcgtggggtgggcgtgaccctggcctctggctcctcctcctgtgccaccgcc
gtggcggctgcgcgccggggcctcacgggccgcaaggtacggatcgatcttgatggcggc
acgctttggatcgactggcgcgccgatggcgtctggatgaccggcccgaccatgcatgtc
gccgatggcgcgttcacccgccagttcctcgaaagcctcgcctcgtga
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