Tritonibacter scottomollicae: R1T40_17035
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Entry
R1T40_17035 CDS
T09466
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
tsco
Tritonibacter scottomollicae
Brite
KEGG Orthology (KO) [BR:
tsco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsco03032
]
R1T40_17035
03036 Chromosome and associated proteins [BR:
tsco03036
]
R1T40_17035
03400 DNA repair and recombination proteins [BR:
tsco03400
]
R1T40_17035
DNA replication proteins [BR:
tsco03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
R1T40_17035
Chromosome and associated proteins [BR:
tsco03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
R1T40_17035
DNA repair and recombination proteins [BR:
tsco03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
R1T40_17035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_euk_2
DUF2267
HU-CCDC81_bac_2
PqqD
Motif
Other DBs
NCBI-ProteinID:
WOI32640
LinkDB
All DBs
Position
3421109..3421402
Genome browser
AA seq
97 aa
AA seq
DB search
MSKPMTKTQLVAALAEEMDSDKKTAGAALDAVCNLITREVSGGGAVTLPGVGKIYCRERP
EREVRNPATGEKFMKEADKVVKMTIAKALKDSVNGDA
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccgatgaccaaaactcagcttgtggcagcgcttgctgaggaaatggacagc
gacaagaaaaccgctggcgccgcgctggatgccgtgtgcaacctgatcacccgtgaagtg
tccggcggtggcgccgtgactctgccgggcgttggcaagatctattgccgtgagcgtccg
gagcgcgaagtgcgcaacccggccaccggcgagaagttcatgaaagaagcagacaaggtc
gtgaaaatgaccatcgccaaagcgctgaaagacagcgtgaacggcgacgcctga
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