Tritonibacter scottomollicae: R1T40_17315
Help
Entry
R1T40_17315 CDS
T09466
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
tsco
Tritonibacter scottomollicae
Pathway
tsco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tsco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R1T40_17315 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsco03019
]
R1T40_17315 (recQ)
03400 DNA repair and recombination proteins [BR:
tsco03400
]
R1T40_17315 (recQ)
Enzymes [BR:
tsco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R1T40_17315 (recQ)
Messenger RNA biogenesis [BR:
tsco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
R1T40_17315 (recQ)
DNA repair and recombination proteins [BR:
tsco03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
R1T40_17315 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Cas3-like_C_2
Rhodanese
Motif
Other DBs
NCBI-ProteinID:
WOI32693
UniProt:
A0ABZ0HCZ5
LinkDB
All DBs
Position
3482278..3484317
Genome browser
AA seq
679 aa
AA seq
DB search
MSDAIPLLRDIFGFDGFRPGQEEIVDAVTAGENVLAIMPTGGGKSLCFQLPALRRDGITV
VISPLIALMRDQVRALQEAGVCAGALTSGNTEEETEAVWNAIEAGELKLLYMAPERLAAG
SAMGMLRRIGVSLIAVDEAHCVSQWGHDFRPDYLRIGELRRALDVPLAAFTATADQETQA
EIVQKLFDGEVPRAFLRGFDRPNIHLAFAAKDSPRKQILEFADARRGQSGIVYCGTRAKT
EDIARALEASGHVACHYHGGMEAEDRRIVETRFAREDGLIVVATVAFGMGIDKPDIRWVA
HADLPKSIEAYYQEIGRAGRDGAPAETMTLFGPEDIRLRRTQIDEGLAPPERRGADHARL
NALLGLAEAMICRRQTLLGYFGEDAQPCGNCDLCDTPVATFDGTTSVRKALSAILRTDET
YGAGHLIDILIGNANDRVRQKRHDDLSVFGCGKDHSKPEWQAIFRQMMGRDLVRPDPERH
GALRMTEPALPILRGEAEITLRKDTVKSAARRPAVKALVSDEDAPLLSALKAKRRALAEA
QKVPAYVIFPDRTLIEMAEKRPQNLDEMARISGVGAKKLERYGDAFLTVITGEAEVLHPA
RRKLAGREQGSIYDTLLEVQARLQRGECGTQKPLTCSASQLAKVAQMRSDDETGLERLLG
ERRAERFAMAFLDVLRGAG
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgcaatccccctgttgcgcgatatctttggcttcgacggctttcggcccgga
caggaagagatcgtcgatgccgtgaccgcgggcgaaaacgtactggcgatcatgcccacc
gggggcggcaaatccctgtgtttccagctgcctgcgctgcggcgcgatgggatcaccgtg
gtgatctcgccgctgatcgccctgatgcgcgatcaggtccgcgccctgcaggaggccggc
gtctgcgcgggcgcgctcacctccggcaacacggaagaagagaccgaggcggtctggaat
gccatcgaggcgggcgagctgaagctgctttatatggcccccgaacgtctggcggcgggc
agcgccatgggcatgctgcgccgcatcggcgtgtcgctgatcgcggtggacgaggcccat
tgcgtcagccagtggggccacgatttccgcccagactatctgcgcatcggagagctgcgt
cgggcgctggatgtgccgctggcggcctttaccgcaacggcggatcaggaaacccaagct
gaaatcgtccagaaactgttcgatggcgaggtgccgcgcgcctttttgcgtggctttgat
cgacccaacatccacctcgcctttgccgcaaaggacagcccacgcaaacagattttggag
tttgccgacgcgcggcgcggtcagtccggcatcgtctattgcggcacccgtgccaagacc
gaggacatcgcccgagcgcttgaggcctccggccatgtggcctgccactatcacggtggc
atggaggccgaggaccggcgcatcgtcgaaacccgctttgcgcgcgaggacggtctgatc
gtggtggccacggtggcctttggcatgggtatcgacaagcctgatatccgctgggtggcc
catgcggatctgcccaaaagcatcgaggcctattatcaggagatcggccgtgccggtcgc
gatggcgccccggcggagacgatgacgctgttcggccccgaggacattcgcctgcgccgc
acccagatcgacgaagggctcgccccgcccgagcgtcgtggcgcggatcatgcgcggctc
aatgcgctgttgggtctggccgaggcgatgatctgtcgccgccagacactgctgggctat
ttcggcgaagacgcgcagccctgcggcaattgcgatctctgcgacacgccggtggcgacc
tttgatggcaccacctcggtgaggaaggcgctgtcggcgatcctgcgcaccgatgagacc
tatggcgcggggcatctgatcgacatcctgatcggcaacgccaatgaccgggtgcggcag
aagcgccatgacgacctgtcggttttcggctgcggaaaggatcactcgaaaccggaatgg
caggcgatctttcgtcagatgatgggccgcgacctggtaaggcccgacccggaacgccac
ggtgcgctgcggatgaccgaaccggcgctgccgatcctgcgcggagaggcggagatcacc
ctgcgcaaggacactgtgaaatccgccgcccgccgtccggcagtgaaggcgctggtctcg
gatgaagacgcgccgctgctctctgccctgaaggcaaagcgccgcgccttggccgaggcg
caaaaagtcccggcctatgtgatcttccccgaccgcaccctgatcgagatggccgagaaa
cgcccgcaaaacctggacgagatggcgcggatcagcggcgtcggcgccaagaagctggag
cgctacggcgatgcctttctcactgtgatcaccggcgaggcagaggtgctgcacccggcg
cggcgcaagctggccgggcgcgaacagggctcgatctacgacacgctgctggaagtgcag
gcgcggttgcaacggggcgagtgcggcacccagaagccgctgacctgttcagcctcgcag
ctggcgaaagtggcgcagatgcgcagtgatgatgaaacgggtcttgaacgtctgctgggg
gagcgccgcgcggaacgtttcgccatggcgtttctggacgtcttgcgcggcgcgggctaa
DBGET
integrated database retrieval system
