Tritonibacter scottomollicae: R1T40_17380
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Entry
R1T40_17380 CDS
T09466
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tsco
Tritonibacter scottomollicae
Pathway
tsco03030
DNA replication
tsco03410
Base excision repair
tsco03420
Nucleotide excision repair
tsco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
R1T40_17380 (polA)
03410 Base excision repair
R1T40_17380 (polA)
03420 Nucleotide excision repair
R1T40_17380 (polA)
03440 Homologous recombination
R1T40_17380 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsco03032
]
R1T40_17380 (polA)
03400 DNA repair and recombination proteins [BR:
tsco03400
]
R1T40_17380 (polA)
Enzymes [BR:
tsco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
R1T40_17380 (polA)
DNA replication proteins [BR:
tsco03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
R1T40_17380 (polA)
DNA repair and recombination proteins [BR:
tsco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
R1T40_17380 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
R1T40_17380 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WOI32705
LinkDB
All DBs
Position
complement(3505208..3508012)
Genome browser
AA seq
934 aa
AA seq
DB search
MSGTQFGKGCHLHLIDGSAFIFRAYHALPPLTRKSDGLPIGAVAGFCNMLQRYVEGNTGP
DAPTHVAVIFDHSGKSFRNDLYDQYKANRPPAPEDLVPQFPLTREATRAFNIACKETEGF
EADDIIATLACQARDAGGRVTIISSDKDLMQLVGDGVEMLDAMKNKRIDSDGVREKFGVG
PDRVVDVQALAGDSVDNVPGAPGIGIKTAALLINEFGSLEELLDRAEEIKQPKRRQTLIE
KREQIEMSKTLVQLDCEMALDFTLDELEVRDPDPEVLLGFLSEMEFRTLTKRLADQLGQE
APTIPETAAPAAQADLPEAPGFDVAEYTTVRDAETLQQWIDRIREHGYVAVDTETTGLDE
MIADLVGICLCVTPGQACYVPLTHKAGNSGDLFGSDDLAEGQMPLEQALEMLKPVLEDDA
ILKIGQNMKYDAKIFVRNGIDVAPIDDTMLLSYALHGGLHGHGMDTLSERYLDHQPIPIK
SLLGTGKSAITFDRVPIDEATPYAAEDADITLRLWQQFKPQLHQKQVTTVYETLERPLVP
VLAQMERHGIKVDRDTLSRMSNAFSQKMAALESEIHELSGESFNVGSPAQLGEILFDKMS
LPGGKRGKNGKYSTGADILEDLATEHELPARVLDWRQLSKLKSTYTDALQEHIHPETGRV
HTSYLQTGANTGRMASSDPNLQNIPVRSEEGRRIREAFVADEGNVLLSLDYSQIELRILA
HVAEIDALKQAFADGHDIHAMTASEIFDVPLDEMTSEIRRKAKAINFGVIYGISGFGLAR
NLRIPRGEAQGFIDRYFERFPGIRHYMDDTVNFAKEHGYVQTLFGRKIHTPEIAAKGPRA
SFAKRAAINAPIQGTAADVIRRAMVRMPEAIAHLPARMLLQVHDELIFEVPEGHVDETIS
VARKIMEGAADPAVHMDVKLVVDAGRGQNWAEAH
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgagcggaacgcaattcggcaaaggctgccatcttcacctgatcgatggctccgccttc
atctttcgcgcctaccacgcgctgccgccgctgacgcgcaaatccgacgggctgccgatc
ggcgcggttgcgggcttttgcaacatgctgcagcgctatgtggagggcaacaccggcccg
gacgcgccgacccatgtggcggtgatcttcgaccattccggcaagagctttcgcaacgat
ctttacgaccaatacaaggccaaccgcccgcccgcgcccgaggacctggtgcctcagttc
ccgctcacgcgcgaggccacccgcgccttcaacatcgcctgcaaagagaccgaaggcttc
gaggccgacgacatcatcgccacgctggcctgtcaggcgcgcgacgccggtggacgggtg
accatcatttcctcggacaaggatctgatgcagctggtgggcgacggcgtcgagatgctg
gatgcgatgaagaacaagcgcatcgacagcgacggcgtgcgcgagaaattcggcgtcggc
cccgaccgggtggtggacgtgcaggcattggcgggcgactcggtcgacaacgtgcccggc
gcccccggcatcggcatcaagaccgccgcgctgctgatcaacgaattcggctctcttgag
gagctgctggaccgtgccgaggagatcaagcagcccaagcgccgccagaccctgatcgag
aaacgcgaacagatcgagatgtcgaaaacgctggtgcagctcgattgcgagatggcgctg
gacttcaccctcgacgagctggaagtgcgcgaccccgacccggaggtgctgctgggcttc
ctgtcggagatggagttccgcaccctgaccaaacggctggccgatcagttgggtcaggag
gcaccgacgatccccgaaaccgccgccccggccgcgcaggcggatctgcccgaagccccc
ggttttgacgtcgccgaatataccaccgtgcgcgatgccgagacgctgcagcagtggatc
gaccgcattcgcgagcatggctatgtcgcggtggataccgaaaccaccggccttgacgag
atgatcgccgatctggtggggatttgcctctgtgtcacccccggacaggcctgctatgtg
ccgctgacccataaggcgggcaattccggcgatctctttggctctgacgatctggccgag
gggcagatgccgctggagcaggcgctggagatgctgaagccggtgctggaggatgacgcg
atcctcaagatcggccagaacatgaagtatgacgccaagatcttcgtgcgcaacggcatc
gacgtggcgccgatcgacgacaccatgctgctgtcctatgcgctgcacggcggcctgcac
gggcatggcatggacacgctgtcggaacgctatctcgaccaccagccgatcccgatcaaa
tctctgctgggcacgggcaaatccgcgatcaccttcgaccgggtgccgatcgatgaagcc
acgccctatgcggccgaagatgccgacattaccctgcgcctgtggcagcagttcaagccg
caactacatcagaaacaggtgaccacggtctacgagacgctggaacgtccgctggtgccg
gtgctggcccagatggagcgtcatggcatcaaggtggaccgcgacacgctgagccggatg
tcgaacgccttttcgcagaagatggcggctttggaatcggaaatccacgagctgtcgggc
gagagcttcaacgtcggctcaccagcgcagctgggggagattctgttcgacaagatgtcc
ctaccgggtggtaagcgcggcaagaacggcaagtattccaccggcgccgatattcttgag
gatctggcgaccgagcatgagctgcccgcccgggtgctggactggcggcagttgtccaag
ctgaaatcgacctacaccgacgcgctgcaggaacatatccacccggagaccggccgggtg
cacacctcctacctgcagaccggtgccaacaccgggcgcatggcctcctccgatccgaac
ctgcagaacatcccggtgcgcagcgaagagggtcggcgcatccgcgaggcctttgtcgcg
gatgaaggcaacgtgctgttgtcgcttgactattcccagatcgagctgcgcatcctcgcc
catgtggcggaaatcgacgcgctgaaacaggcctttgccgacggtcatgacattcacgcc
atgaccgcctcggagatcttcgacgtgccgctggacgagatgacctcggaaatccgccgc
aaggcgaaggcgatcaacttcggggtgatttacggaatttcgggctttggcctggcgcgc
aacctgcgcatcccgcgcggcgaggcgcagggctttatcgaccgctacttcgaacgcttc
cccggcattcgtcattatatggacgacacggtgaatttcgccaaggagcacggctatgtg
cagacgctgtttggccgcaagatccacacgccggagatcgccgccaagggaccccgggcg
agctttgccaaacgcgcagcgatcaacgccccgatccagggcacggcggcggatgtgatc
cgccgcgccatggttcggatgccggaggcgatcgcccacctaccggcccgcatgttgttg
caggtgcacgatgaattgatattcgaggttccagaaggtcacgtggatgagaccatttcg
gtcgcccgcaagatcatggaaggcgctgccgatccggcggtgcatatggacgtgaaactg
gtggtggacgccggtcgcggccagaactgggcagaggcgcattaa
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