Tritonibacter scottomollicae: R1T40_20445
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Entry
R1T40_20445 CDS
T09466
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
tsco
Tritonibacter scottomollicae
Pathway
tsco00550
Peptidoglycan biosynthesis
tsco01100
Metabolic pathways
tsco01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
tsco00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
R1T40_20445 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
R1T40_20445 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tsco01011
]
R1T40_20445 (mrdA)
Enzymes [BR:
tsco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
R1T40_20445 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
tsco01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
R1T40_20445 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
WOI33258
LinkDB
All DBs
Position
complement(4124681..4126627)
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AA seq
648 aa
AA seq
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MKRTPKDQDHSHRTLTRRTLLLGGLQLGFTGALAMRMRFLQVDQADQFRLLAEENRINIR
LLAPSRGEIYDRNGIIIAQNSPSYRIVLVPEDAGDVEGVIENLTRLLPLDTEDLERARAE
MRRSRPFLPITLADQLSWDDISKVAVNAPALPGITPEVGLSRVYPQGADFAHVVGYVGPV
SDYDLSKMESPDPVLLTPRFQFGKVGFESKREETLRGKAGTKRVEVNAAGRIMRELDRRE
GQPGADVQLTLDADLQSYVQARLGNESAAAVVIDVENGDLQAICSSPSFDPNLFVRGISV
ADYSALTEDPYRPLANKTVQGTYPPGSTFKMVTALAGLESGVITPEETTWCPGHLEVSGR
RFHCWKRAGHGHVNLLDSLKSSCDVYYYDLAIKVGIDRISEMANKLGLGIRHDIPMSAVA
AGLAPNREWKSRTYGQDWLVGDTVNASIGQGYMLASPMQLAVMTARIANGRSVTPRLVKS
INGVEQPSGAGEMIGLTPSYLDHVRKAMYAVSNDRRGTGYRSRIIADGMRMAGKSGTSQV
RNITAAERATGVIHNRDLPWERRDHALYVCFAPYDKPKYAVAVVVEHGGGGSSTAAPVAR
DVLLQALYGGTPPLEAYPTGDRRKIKAQQERLERERIKRSDGKESDQA
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacgcaccccgaaggaccaggatcacagccatcgcaccctgacccgccgcaccctg
ctgctgggcgggttgcagctgggctttaccggtgcgctggccatgcggatgcgttttctg
caggtggatcaggcagatcagttccgtctgctggccgaggaaaaccgcatcaacatccgc
ctgctcgcccctagtcgcggcgagatctatgaccgcaacggtattatcatcgcgcaaaac
tccccgtcctaccgcatcgtgttggtgcccgaagacgccggtgatgtggaaggcgtgatt
gaaaacctcacccgtttgctgccgctcgatacagaggacctggaacgtgcgcgcgcagag
atgcggcggtcgcgtccgtttctccccatcacgctggccgatcagctttcctgggatgac
atttcaaaagtcgcggtcaacgccccagccctgccgggcatcacgcccgaggtcggactg
tcccgtgtctatccgcagggcgccgattttgcgcatgtggttggctatgtcggtcctgtc
tccgactacgacctgtcgaagatggaaagccccgatccggtcttgctgaccccacggttc
caattcggcaaggtcggttttgagtccaaacgtgaggaaaccctgcgcggcaaggccggg
accaaacgggtcgaggtcaatgccgccggtcggatcatgcgcgaactggatcgccgcgag
gggcagcccggcgcggatgtgcagctgacgctcgatgcggacctgcaaagctacgtgcag
gcccggcttggcaacgaaagcgccgccgccgttgtgatcgacgtggagaatggcgatctg
caggccatctgctccagcccgagctttgaccccaacctctttgtgcgcggcatctctgtg
gccgactatagcgccctcaccgaagacccctatcgcccgctggccaacaagaccgtgcaa
ggcacctacccgccgggctccacattcaagatggtgacggcgctggcgggactggaaagc
ggcgtcattacaccggaagaaaccacatggtgccccgggcatctggaagtgtccggccgg
cggttccactgctggaagcgcgccggtcatgggcacgtcaaccttctggattcactaaag
agttcctgtgacgtctactattacgatctggcgatcaaggtcgggatagaccggatttcg
gagatggccaacaaactcggccttggtattcgccacgatattccgatgtccgcagtggcc
gccggacttgctccgaaccgggaatggaagtcccgcacctatgggcaggattggctggtt
ggcgacacggtgaatgcctcgatcggtcagggctatatgcttgcgtcgcccatgcagctt
gcggtcatgacagcacggattgccaacggccgcagtgtcacacctcgtctggtgaaatcc
atcaatggtgtcgaacaaccttctggcgcaggtgaaatgatcggcctcaccccctcgtat
ctggatcacgtgcgcaaggccatgtacgcggtcagcaatgatcgccgcggcaccgggtat
cggtcccgcatcattgccgatggcatgcgcatggcgggcaagtccggcaccagtcaggtg
cgcaacatcaccgcagcagagcgcgcgacaggggtgatccataaccgggacctgccatgg
gaacgccgcgaccacgctctgtatgtgtgttttgccccctatgacaaaccaaagtacgcg
gttgcggtcgttgtcgaacatggcggcggcggatcctccacagccgcccccgtggcgcgg
gatgtattgctgcaagcgctctatggcggcacgccaccgctggaggcctatccgaccgga
gaccgccgcaagatcaaggcacagcaggagcggctcgaacgcgagcggattaaacgctcg
gacgggaaagagagcgatcaggcatga
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