Tritonibacter scottomollicae: R1T40_20935
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Entry
R1T40_20935 CDS
T09466
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
tsco
Tritonibacter scottomollicae
Pathway
tsco00521
Streptomycin biosynthesis
tsco00523
Polyketide sugar unit biosynthesis
tsco00525
Acarbose and validamycin biosynthesis
tsco00541
Biosynthesis of various nucleotide sugars
tsco01100
Metabolic pathways
tsco01110
Biosynthesis of secondary metabolites
tsco01250
Biosynthesis of nucleotide sugars
Module
tsco_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
tsco00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
R1T40_20935 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
R1T40_20935 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
R1T40_20935 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
R1T40_20935 (rfbB)
00525 Acarbose and validamycin biosynthesis
R1T40_20935 (rfbB)
Enzymes [BR:
tsco01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
R1T40_20935 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
adh_short_C2
NmrA
Sacchrp_dh_NADP
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
WOI35355
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All DBs
Position
unnamed2:20415..21467
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AA seq
350 aa
AA seq
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MKILVTGGAGFIGSAVVRQAIAAGHEVVNVDALTYAACLDNVASVADSPRYAFEQADIRD
RAALDRVFAYHAPDMVMHLAAESHVDRSIDGPGDFIETNVTGTFNMLEAARKFWAAVGKP
ARFRFHHISTDEVYGSLPADKSVMFTEDTAYDPRSPYSASKASSDHLVRAWHETYGLPVV
LTNCSNNYGPYHFPEKLIPVVILNALAGQALPIYGDGSNIRDWLYVEDHADALLCVLQKG
ENGRSYNIGGENERSNLELVETLCAILDDKRPRDDGKSYKAQITFVTDRPGHDARYAIDP
SRIRDELGWRPSVTVEEGLAKTVQWYLDNEDWWRALQSRTGVGERLGVKA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaagatactggtgacaggcggggcggggttcattggctctgcggtggtgcggcaggcg
attgccgctggccatgaggtggtgaacgtcgatgcgctgacctatgcggcctgcctggac
aatgtggccagcgtcgcggacagcccgcgatatgcctttgagcaggccgacatccgcgac
cgcgccgcgctggaccgggtctttgcctatcatgcgccggatatggtgatgcacctggcc
gccgaaagccatgtggaccgctcgatcgacgggccgggcgatttcatcgaaaccaatgtc
accggcacgttcaatatgctggaggcggcgcgcaagttctgggccgcggtgggcaaaccc
gcccggttccggtttcaccatatctccaccgatgaggtctatggctccctgcctgccgac
aaatctgtgatgttcaccgaagacaccgcctatgatccgcgctcgccctattcggcgtcg
aaagcctcttcggatcatctggtgcgcgcttggcatgagacctacgggctgccggtggtg
ctcacgaattgctccaacaactacggcccctatcatttcccggaaaaactgatcccggtg
gtgatcctcaatgcgctcgccggccaggcactgccgatctatggcgacgggtcgaacatc
cgcgactggctttatgtggaggatcacgccgacgccctgctctgcgtgctgcagaagggc
gagaacgggcgcagctacaatatcgggggcgagaacgagcgcagcaacctggagctggtg
gagacgctctgtgcgatcctcgatgacaagcgcccgcgcgacgatggcaaatcctacaag
gcgcagatcacctttgtgacggatcggccgggccatgatgcccgctatgccatcgacccc
agccggatccgggacgagctgggctggcgtccttcggtcaccgttgaagaagggctggca
aaaaccgtgcagtggtatctcgacaatgaggactggtggcgcgcgcttcagtcccgcacc
ggcgtcggcgagcggctgggcgtgaaggcataa
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