Tsukamurella sp. PLM1: MTP03_00130
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Entry
MTP03_00130 CDS
T09545
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
tsd
Tsukamurella sp. PLM1
Brite
KEGG Orthology (KO) [BR:
tsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsd03032
]
MTP03_00130 (gyrB)
03400 DNA repair and recombination proteins [BR:
tsd03400
]
MTP03_00130 (gyrB)
Enzymes [BR:
tsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
MTP03_00130 (gyrB)
DNA replication proteins [BR:
tsd03032
]
Prokaryotic type
DNA Topoisomerases
MTP03_00130 (gyrB)
DNA repair and recombination proteins [BR:
tsd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MTP03_00130 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
BDH55074
LinkDB
All DBs
Position
10771..12834
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AA seq
687 aa
AA seq
DB search
MAADNNGKNGSGSYGADSIKQLEGLEAVRKRPGMYIGSTGPRGLHHMIQEVVDNSVDEAM
AGYATRVDVRLLEDGGVEVVDDGRGIPVAMHAKGMPTVQLVLTSLHAGGKFDSDAYAVSG
GLHGVGVSVVNALSSRVEVEIDVDGFHWRNDFHWDDKKRDVVAGDLIKGEPTDRTGTVVR
FWADPKVFTETTFYDFETVSRRLQEMAFLNKGLTITLTDERPAVAEVPDEDTTEAAPSAQ
EDDVAAALSEVTPRKRERIFHYPDGLVDYVKHINARTSKTPIHGTIISFEGKEKGHEVEI
AMQWNSGYSESVHTFANTINTHEGGTHEEGFRTALTSIVKAYAKDKKLVKEKDGDLTGDD
IREGLAAVISVKVAEPQFEGQTKTKLGNTEIRGFVQKVAREQLQFWFDSNPADAKTIVQK
AAASAQARLAARKARELVRRKSATDIGGLPGKLADCRSNDPDKCEVYIVEGDSAGGSAKS
GRDSMYQAILPIRGKIINVEKARIDKVLKNTEVQSIITAFGTGIHDEFDIAKLRYKKIVL
MADADVDGQHISTLLLTLLFRFMRPLVEHGHVYLAQPPLYKLKWQKGADPEFAYSDRERD
VLLEEGLKNGKKINKDDGIQRYKGLGEMNAKELWETTMDPTVRVLKQVTLDDAAAADELF
SILMGEDVVARRSFIARNAKDVRFLDV
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
gtggcggctgacaacaacggcaagaacggctccggctcgtacggtgccgactccatcaag
cagctcgagggcctggaggcggtgcgcaagcgccccggcatgtacatcggcagtaccggc
ccgcgcggcctgcaccacatgatccaggaggtcgtcgataactcggtcgacgaggcgatg
gccggctacgccaccagggtggacgtgcggctgctggaggacggcggcgtcgaagtggtg
gacgacggccgcgggatccccgtcgccatgcacgccaagggcatgcccacggtgcagctg
gtgctcacgtcgttgcacgccggcggcaagttcgactcggacgcctacgccgtgtccggc
ggcctacacggcgtcggcgtctcggtggtgaacgcgctgtccagccgggtcgaggtcgag
atcgacgtcgacggcttccactggcgcaacgacttccactgggacgacaagaagcgcgac
gtggtcgcgggcgacctgatcaagggcgaacccaccgaccgcaccggcaccgtcgtgcgg
ttctgggctgatccgaaggtgttcaccgagaccaccttctacgatttcgagaccgtctcg
cggcgcctgcaggagatggccttcctcaacaagggcctcaccatcaccctcaccgacgag
cggcccgccgtcgccgaggttcccgacgaggacacgaccgaggcggcaccgtcggcacag
gaggacgacgtggccgcggcgctgtccgaggtcacgccgcgcaagcgcgagcgcatcttc
cactacccggacggcctcgtcgactacgtcaagcacatcaacgcgcgcacgtcgaagacg
ccgatccacggcacgatcatctccttcgagggcaaggagaagggccacgaggtggagatc
gccatgcagtggaactccggctactcggagtccgtgcacaccttcgcgaacaccatcaac
acgcacgagggcggcacccacgaggagggcttccgcacggcactgacctcgatcgtcaag
gcgtacgcgaaggacaagaagctggtcaaggagaaggacggcgacctcaccggcgacgac
atccgcgagggcctcgcggccgtcatctcggtcaaggtcgccgagccgcagttcgagggc
cagaccaagaccaagctcggcaacaccgagatccgcggcttcgtgcagaaggtggcccgc
gagcagctgcagttctggttcgactcgaacccggccgacgcgaagaccatcgtgcagaag
gccgctgcctccgcccaggcccggctcgcggcccgcaaggcgcgcgagctggtgcggcgc
aagagcgccaccgacatcggcggcctgcccggcaagctcgccgactgccgcagcaacgac
cccgacaagtgcgaggtctacatcgtggagggcgactccgccggcggctccgccaagagc
gggcgcgactcgatgtaccaggcgatcctgcccatccgcggcaagatcatcaacgtcgag
aaggcccggatcgacaaggtgctcaagaacaccgaggtccagtcgatcatcacggcgttc
ggcaccggcatccacgacgagttcgacatcgccaaactgcgctacaagaagatcgtgctc
atggccgacgccgacgtggacggccagcacatctcgacgctgctgctgaccttgctgttc
cgtttcatgcggccgctcgtcgagcacgggcacgtctacctggcgcagcctccgctgtac
aagctcaagtggcagaagggcgccgacccggagttcgcgtacagcgaccgcgagcgcgac
gtcctcctcgaggagggcctgaagaacggcaagaagatcaacaaggacgacggcatccag
cgctacaagggcctcggcgagatgaacgccaaggagctgtgggagaccacgatggatccg
acggtccgcgtgctcaagcaggtgacgctcgacgatgccgccgccgccgacgagctgttc
tcgatcctcatgggcgaggacgtggtggctcgccgctcgttcatcgcgcgcaacgccaag
gacgtgcggttcctcgacgtgtga
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