Tsukamurella sp. PLM1: MTP03_11080
Help
Entry
MTP03_11080 CDS
T09545
Name
(GenBank) putative 3-methyladenine DNA glycosylase AlkA
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
tsd
Tsukamurella sp. PLM1
Pathway
tsd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MTP03_11080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsd03000
]
MTP03_11080
03400 DNA repair and recombination proteins [BR:
tsd03400
]
MTP03_11080
Enzymes [BR:
tsd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
MTP03_11080
Transcription factors [BR:
tsd03000
]
Prokaryotic type
Helix-turn-helix
AraC family
MTP03_11080
DNA repair and recombination proteins [BR:
tsd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MTP03_11080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
BDH56169
LinkDB
All DBs
Position
complement(976232..977695)
Genome browser
AA seq
487 aa
AA seq
DB search
MTTSSPHLDFDRCYRAIAARDARFDGQFFTAVASTGIYCRPSCPATTPRAENVSFHVTAA
AAQAAGYRACRRCLPDAVPGSPRWNLESDLAARAMRLIADGAVDRSGVTGLAERLGYSPR
QLTRVLTAELGAGPLALARAHRAATARMLILGTAMPFSDIAFAAGFTSIRQFNDTIREVF
ARTPSQLRSGGRAAPSNGTGELTLRLALRGPYDTGWVRWFLAAHAVPGLEHADGDRYTRV
LNLPGGNGIATVDLGSVPDGYVRTTLSLASMSDLSAAVARLRHLLDLDADPLAIDEALAA
DPHLAPLVAGTPGIRLFGCVDPAELLLRTMIGQQISIAAAATHQARLVAALGDEVSDPAG
RVSRAFPTPAAVAERGGEVLTGPRSRIAAIRGAAAELAEGRLHLHAGLTRADARAELLRL
KGVGPWTADYVAMRLLADPDTLLASDLVVAKGAERIGLDIAANRWSPWGSYVSLHLWNHA
LTTDRRK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaccagctcaccccacctcgacttcgaccggtgctaccgggcgatcgccgcgcgc
gacgcgcggttcgacgggcagttcttcaccgcagtggccagcacggggatctactgccgc
ccgtcgtgtccggcgacgacaccccgggccgagaacgtctcgttccacgtcacggcggcc
gccgcgcaggcagcgggctaccgggcgtgccggcgctgcctgcccgacgccgtgcccgga
tcgccgcggtggaacctcgagtccgacctcgcggcgcgcgccatgcgcctcatcgccgac
ggtgcggtggaccggtccggcgtgacgggcctcgccgagcgactcggctacagcccgcgc
cagctcacccgcgtgctcaccgcggaactcggcgcgggaccgctcgcgctggcccgggcg
caccgcgccgcgaccgcgcggatgctcatcctgggcaccgcgatgccgttctccgacatc
gccttcgccgccggattcacctcgatccgccagttcaacgacacgatccgcgaggtcttc
gcgcgcaccccctcgcagctccggtccggcgggcgggcggcaccgtcgaacggcacgggc
gagctgacactgcggctggcactacgcggaccgtacgacacgggatgggtgcggtggttc
ctcgccgcacacgcggtgcccggactcgagcacgccgacggtgaccgctacacccgcgtg
ctgaacttgccgggcggcaacgggatcgccaccgtcgacctgggatccgtccccgacggg
tacgtccgtaccaccctgtcgctcgcctcgatgagcgacctgtcggcagcggtcgcgcgg
ctgcggcacctgctggacctggacgcggatccgctcgccatcgacgaggccctcgccgcc
gacccgcacctggccccgctggtcgcaggcacccccgggatccggctgttcggttgcgtc
gaccccgcggaactgctgctgcgcaccatgatcgggcagcagatctcgatcgcggccgcc
gccacccaccaggcgcgcctggtggccgcgctgggcgacgaggtgagcgacccggccggc
cgggtgagccgcgcgttccccacgcccgctgcggtggccgagcggggcggcgaggtgctc
accgggccgcggagccggatcgcggcgatccggggcgccgccgcggaactcgcggagggt
cggctgcacctgcatgcgggcctgacccgcgccgatgcccgcgcggagctgttgcgtctc
aaaggcgtcggtccgtggaccgccgactacgtcgcgatgcggctgctcgccgaccccgac
actctcctcgcgtccgacctcgtagtcgccaagggcgcggagcggatcggcctcgacatc
gccgccaaccgctggagcccgtggggcagctacgtctcgctgcacctgtggaaccacgcc
ctcaccaccgaccggaggaaatga
DBGET
integrated database retrieval system
