Tsukamurella sp. PLM1: MTP03_14400
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Entry
MTP03_14400 CDS
T09545
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
tsd
Tsukamurella sp. PLM1
Pathway
tsd03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tsd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MTP03_14400 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsd03019
]
MTP03_14400 (orn)
03009 Ribosome biogenesis [BR:
tsd03009
]
MTP03_14400 (orn)
Messenger RNA biogenesis [BR:
tsd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MTP03_14400 (orn)
Ribosome biogenesis [BR:
tsd03009
]
Eukaryotic type
Pre-60S particles
RNases
MTP03_14400 (orn)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF7149
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
BDH56501
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All DBs
Position
complement(1293703..1294317)
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AA seq
204 aa
AA seq
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MATLIGVDDKLVWVDCEMTGLDTTSDRLIEIAALVTDGDLNILGEGVDLVIHADDAALAA
MPPVVQEMHERSGLTEEVRASTISVRAAEEAVLAYLREHIEAGAVPLAGNSIATDRRFIA
NEMPELDAFLHYRMVDVSSIKELCRRWYPRIYFGQPDKGLAHRALADIRESIRELKYYRS
TAFVPAPGPTTEEVTAAAAALGPA
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
ttggctacgctgatcggcgtggacgacaaactggtgtgggtcgattgtgagatgaccggc
ctcgatacgacctccgaccggctcatcgagatcgccgccctggtgacggacggcgacctc
aacatcctcggcgagggcgtggacctggtgatccacgcggacgacgccgcgctcgcggcg
atgccgcccgtggtgcaggagatgcacgagcggtccggtctcaccgaggaggtccgggcg
tcgacgatctccgtccgcgcggctgaggaagcggtgttggcctacctgcgcgagcacatc
gaggcgggggccgtgccgctggccggcaactcgatcgccaccgaccgtcggttcatcgca
aacgagatgcccgagctcgacgcgttcctgcactaccgcatggtggacgtcagttcgatc
aaggagctgtgccggcgctggtacccccggatctacttcggccagcccgacaagggcctg
gcacaccgcgcgctcgccgacatccgcgagtcgatccgcgagttgaagtactaccgcagc
accgccttcgttccggcccccggtccgacgaccgaggaggtcaccgcggcggccgcagcc
ctcggacctgcctga
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