Tsukamurella sp. PLM1: MTP03_14420
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Entry
MTP03_14420 CDS
T09545
Name
(GenBank) hypothetical protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
tsd
Tsukamurella sp. PLM1
Brite
KEGG Orthology (KO) [BR:
tsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsd03400
]
MTP03_14420
DNA repair and recombination proteins [BR:
tsd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
MTP03_14420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
TrwB_AAD_bind
ResIII
DEAD
FtsK_SpoIIIE
AAA_30
SLFN-g3_helicase
DUF5852
AAA_19
T2SSE
P-loop_TraG
AAA_7
Zeta_toxin
AAA_16
Motif
Other DBs
NCBI-ProteinID:
BDH56503
LinkDB
All DBs
Position
1295401..1296846
Genome browser
AA seq
481 aa
AA seq
DB search
MTDNANSPAQTIAAGYDFTGPALELGTVLVDGTVDPSAKVRIPLAMMNRHGLVAGATGTG
KTKTLQLIVEQLSANGVPVVLADIKGDLAGLSKPGESNDKVTSRATDTGDDWKASSVPTE
FVSLGTGGVGVPIRATISSFGPILLSKVLGLNATQESTLGLIFHWADQNQLELLDLKDLR
SVIAYLTSAEGKADLEGIGGVSKQTAGVILRALVNLEAEGDTFFGEPEIDMGDLLRTAGG
QGVVTLVELGDQAARPALFSTFLMWVLADLFQYLPEAGDLDKPKLVFIFDEAHLLFADAS
KAFKEQVEQTVKLIRSKGVGVFFCSQLPTDIPNPVLSQLGARIQHALRAFTPEDQAALSK
TVKTYPTSSAYKLDEALTSLGIGEAIVTVLSDKGAPTPVAWTRLRAPRSLMSAIGDDAIR
SAAQASPLWAKYSQTVDNLSAFEKLSANAQQAQQENAPAEQAPPPRPRRSSRTTIRGGCP
T
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
gtgactgacaacgcgaactccccggcgcagacgatcgcggccggctacgacttcacgggg
cccgccctggagctcgggaccgtcctcgtggacggcaccgtcgacccgtcggccaaggtc
cggatcccgctggccatgatgaaccggcacggcctcgtcgcgggagccaccggcaccggc
aagacgaagacgctgcagctcatcgtcgagcagctgtcggccaacggggtgcccgtcgtg
ctcgccgatatcaagggcgacctggccggcctgtcgaagccgggcgagtcgaacgacaag
gtgacttcgcgcgccaccgacaccggcgacgactggaaggcgtcctcggtcccgacggag
ttcgtctcgctgggcaccggcggcgtcggcgtcccgatccgtgccaccatctcgtcgttc
gggccgatcctgctctcgaaggtgctgggcctcaacgccacccaggagtcgacgctcggc
ctgatcttccactgggccgatcagaaccagctcgagctgctggacctcaaggacctgcgt
tcggtgatcgcctatttgacctccgcggaggggaaggccgacctcgagggcatcggcggc
gtcagcaagcagaccgccggcgtgatcctgcgcgccctggtcaacctcgaggcggagggc
gacaccttcttcggcgagcctgagatcgacatgggcgacctgctccgcaccgccggcggg
cagggcgtggtcacgctcgtcgagctcggcgaccaggccgcgcggcccgccctgttctcg
accttcctcatgtgggtcctggcggacctgttccagtacctgcccgaggctggcgacctg
gacaagcccaagctcgtcttcatcttcgacgaggcgcacctgctgttcgcggacgccagc
aaggcgttcaaggaacaggtcgagcagacggtcaagctgatccggtcgaagggcgtgggt
gtgttcttctgctcgcagttgccgacggatatcccgaacccggtgctcagccagctcggc
gcgcggatccagcacgcgctgcgcgccttcacgccggaggatcaggccgcgctgagcaag
acggtcaagacgtacccgacctcgtccgcgtacaagctcgatgaggccctcacgagcctc
ggcatcggcgaggcgatcgtcaccgtcctgtccgacaagggcgcgccgacgccggtcgcg
tggacccggttgcgcgcgccgcgctcgctcatgtcggcgatcggcgacgatgcgatccgc
tcggccgcgcaggcctcgccgctctgggccaagtactcgcagacggtcgacaacctctcg
gccttcgagaagctgtcggccaacgcccagcaggcgcagcaggagaacgcgcccgccgag
caggcgccgccgccccgcccgcgccgaagcagcaggacgacgatccggggtgggtgtccg
acgtga
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