Tsukamurella sp. PLM1: MTP03_27500
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Entry
MTP03_27500 CDS
T09545
Name
(GenBank) DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tsd
Tsukamurella sp. PLM1
Pathway
tsd03030
DNA replication
tsd03410
Base excision repair
tsd03420
Nucleotide excision repair
tsd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MTP03_27500
03410 Base excision repair
MTP03_27500
03420 Nucleotide excision repair
MTP03_27500
03440 Homologous recombination
MTP03_27500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsd03032
]
MTP03_27500
03400 DNA repair and recombination proteins [BR:
tsd03400
]
MTP03_27500
Enzymes [BR:
tsd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MTP03_27500
DNA replication proteins [BR:
tsd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MTP03_27500
DNA repair and recombination proteins [BR:
tsd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MTP03_27500
NER (nucleotide excision repair)
GGR (global genome repair) factors
MTP03_27500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_lambd_f
HHH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BDH57811
LinkDB
All DBs
Position
complement(2481854..2484607)
Genome browser
AA seq
917 aa
AA seq
DB search
MTSANPPATVAPAPGSSAEVGERPTMLLIDGHSMAFRAFFALPLDGGRFRTKSGQPTNAV
YGFTSMLIKLLKEEAPGYVAAAFDVSRQTFRAEMYPEYKAQRSSAPDDFRGQVDVVKDVL
TAMGIPTMAQEGYEADDIIATMTTQAQAQGFKVLIVTGDRDALQLVNENVTVLYPRKGVS
DLTRFTPEEVEAKYGLTPSQYPDYAALRGDPSDNLPGIPGVGEKTAAKWIREYGSLEGLV
ENVDKVRGKVGDSLRENLATVQLNRQITEMVRDMSLPYVPADLALQPWNREAIHQLFDDL
EFRVLRDRIFTELASSEPEADEGFEISGGIVAAGTVADWLAEHGASGERSGLGVVGPEVV
VDGDAEAVVIAAPDGEGGYIELSSLTPEDEAALGAWLADEAQPKAVHEAKWAMHALESRG
WALGGLTSDTAIAAYLVRPGQRSFNLDDLSVRYLHRELRVESSAGADAQLSLLDDPDDSA
AQRAQEQMLRARAVLDLAAALDVELDAIESKPLLAEMELPLLRVLDVMEATGIAVDTAHL
ESLHSEFSERIRAAEASAFEEIGEQINLGSPKQLQVVLFDKLGLPKTKKTKTGYTTDAAA
LEALYEKEPHPFLQHLLEHRDATRLKVTVEGLLKTVASDGRIHSTFNQTVAATGRLSSTD
PNLQNIPVRTEAGRQIRHAFVAGEGYETLMTADYSQIEMRIMAHLSGDEGLIEAFNTGED
LHNFVGSKAFGVPIDEVTPDMRRRVKAMSYGLAYGLSAFGLAAQLKISRDEAKEQMEAYF
ARFGGVRDYLQHVVVEATRNEYTETIYGRRRYLPDLTSTNRMRREAAERMALNAPIQGSA
ADIIKVAMIRLHERIREAGLKSRMLLQVHDELVLEVAAGEREQLEALVRDTMGGAAELSV
PLDVSVGYGRSWDDAAH
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
gtgacttcagcgaaccccccggccaccgtcgcgcccgcccccggatcgtcggcggaggtg
ggggagcggcccacgatgctcctcatcgacgggcactcgatggcgttccgcgcgttcttc
gcgctcccgctcgacggtggccgtttccgcaccaagtccgggcagccgacgaacgccgtg
tacggcttcacctcgatgctgatcaagctgctcaaggaggaggcgcccgggtacgtggcc
gcggcgttcgacgtctcgcggcagacgttccgcgccgagatgtaccccgagtacaaggcg
cagcgctcctccgcacccgacgacttccggggccaggtggacgtggtgaaggacgtgctc
accgcgatgggcatccccaccatggcgcaggaggggtacgaggcggacgacatcatcgcc
acgatgacgacgcaggcgcaggcgcagggcttcaaggtgctcatcgtcacgggtgatcgg
gacgcgctgcagctggtcaacgagaacgtgacggtgctctacccgcgtaagggtgtctcg
gacctcacccggttcaccccggaggaggtggaggcgaaatacggcctcaccccgtcgcag
tacccggactacgcggcgctgcgcggcgacccgtcggacaacctgcccggcatccccggc
gtcggcgagaagactgcggccaagtggatccgcgagtacggcagcctcgaggggctcgtg
gagaacgtcgacaaggtgcgcggcaaggtgggggattcgctgcgcgagaacctcgccacg
gtgcagctgaaccggcagatcaccgagatggtgcgcgacatgtcgttgccctacgtcccg
gccgacctcgcgctgcagccgtggaaccgtgaggccatccaccagctgttcgacgatctg
gaattccgggtcctgcgcgaccggatcttcaccgagctggcctcgtcggagccggaggcg
gacgagggtttcgagatctcgggcggcatcgtcgccgccggcaccgtcgccgactggctc
gccgagcacggcgcctcgggggagcggtccgggctgggcgtggtcggcccggaggtcgtc
gtcgacggtgacgcggaggcggtcgtgatcgccgccccggacggcgagggcggatacatc
gagctgtcctccctgacgcccgaggacgaggcggcgctcggggcgtggctggccgacgag
gcacagccgaaggcggtgcacgaggcgaagtgggccatgcacgcgctggagagccgcggc
tgggcgctcggcggcctcacgtcggacaccgccatcgcggcgtacctggtgcgcccgggg
cagcgcagcttcaacctcgacgacctctcggtgcgctacctgcatcgcgagctgcgcgtg
gagtcgtccgccggcgccgacgcgcagttgtcgctgttggacgatcccgacgattcggcg
gcgcagcgggcccaggagcagatgctgcgggcgcgcgcggtgctcgacctcgcagcggcg
ctggacgtggagctcgacgcgatcgagtcgaagccgctgctggccgagatggagctgccg
ctgctgcgggtgctcgacgtcatggaggccaccggcatcgcagtggacaccgcgcacctc
gaatccctgcacagcgagttcagcgagcggatccgcgccgcggaggcgtcggcgttcgag
gagatcggcgagcagatcaatctcggctcgccgaagcagttgcaggtggtcctgttcgac
aagctcggcctgccgaagacgaagaagaccaagacgggatacaccaccgacgccgcggcg
ctcgaggcgctgtacgagaaggagccgcacccgttcctgcagcacctgctcgaacatcgg
gacgcgacccggctcaaggtcaccgtcgagggcctgctcaagaccgtcgcctcggacggg
cggatccactccaccttcaaccagacggtggcggccacgggccggctgtcgtcgacggac
ccgaacctgcagaacatccccgtccgcaccgaggcggggcggcagatccggcacgcgttc
gtcgcgggcgagggctacgaaaccctgatgacggcggactacagccagatcgagatgcgg
atcatggcgcacctgtccggcgacgagggcctgatcgaggcgttcaacaccggcgaggac
ctgcacaacttcgtcgggtccaaggcgttcggcgttccgatcgacgaggtgacgcccgac
atgcggcgccgggtcaaggccatgtcgtacgggctcgcctacgggctgtcggcgttcggg
ctcgccgcgcagctgaagatctcccgcgacgaggcgaaggagcagatggaggcgtacttc
gcccgcttcggcggcgtgcgcgactacctgcagcacgtggtcgtggaggccacccgcaac
gagtacaccgagacgatctacgggcgccggcgctacctgccggacctcacctcgaccaac
cggatgcgccgcgaggccgccgagcggatggcgctgaacgccccgatccagggcagcgcc
gctgacatcatcaaggtcgcgatgatccggctgcacgagaggatccgcgaggccgggctg
aagtcgcgcatgctgctgcaggtgcacgacgagctggtgctcgaggtggccgccggtgag
cgcgagcagctcgaggcactggtccgcgacaccatgggcggcgcggcggagctgtccgtg
ccgctggacgtgtccgtgggctacggccgcagctgggacgacgcggcgcactag
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