Tsukamurella sp. PLM1: MTP03_30340
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Entry
MTP03_30340 CDS
T09545
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tsd
Tsukamurella sp. PLM1
Pathway
tsd03030
DNA replication
tsd03430
Mismatch repair
tsd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MTP03_30340
03430 Mismatch repair
MTP03_30340
03440 Homologous recombination
MTP03_30340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsd03032
]
MTP03_30340
03400 DNA repair and recombination proteins [BR:
tsd03400
]
MTP03_30340
Enzymes [BR:
tsd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MTP03_30340
DNA replication proteins [BR:
tsd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MTP03_30340
DNA repair and recombination proteins [BR:
tsd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MTP03_30340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
UVR
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
BDH58095
LinkDB
All DBs
Position
2747562..2749379
Genome browser
AA seq
605 aa
AA seq
DB search
MQLSLDDCESGITDPDLRDVTFVVVDLETTGGSPKAGDAITEIGAVKVRGGEVLGEFATL
VDPGRGIAPHITHLTGITTAMVTGAPRIESVLPAFLEFAHGAVLVAHNARFDLGFLKAAA
AATGTPWPKPASLCTVQLARRVLTRDEAPSVKLSELARLFRTETTPNHRALDDARATVEV
LHGLIGRVGNLGIHTLGELRGHLPSVTPQQRAKRVLADHLPERPGVYLFRGPGDEVLYVG
TSRDLRRRVRSYFTSGETRGRIKEMVGLAERVDHVECAHALEAAARELRLIAAHTPQYNR
RSKYPRRGWWIQLTAEPFPRLAVRRSATVGTPCLGPIRSRTDAADLAELLAETCGLRTCT
TRLLAGAAHTCALGPDGARPLGGCHASVASPEPAALYRPRVERAAAALTGRSSEVFDRLQ
ERLAALADREFFESAARLRDRTAQLVDVVARSHALAAFADVPELSLAHPDGSGGWELSIV
RHGRLAAAGVAPRGVPPMPVFDRLRTGAESVYEADAAPDVPDTLFPADALHGASPEEASL
LRRWALRPGTRIVDVQGTWGEPARGAGPWVEWAARAAEAGRDARAAAAGPRASGRQYSEE
ATHAA
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcagcctcgacgattgcgagagcgggatcacggatcccgacttgcgggacgtg
acgttcgtcgtggtggatctggagaccaccgggggctcccccaaggcaggggacgcgatc
accgagatcggcgcggtcaaggtgcgcggcggtgaagtgttgggcgagttcgccacgctc
gtcgaccccggccgcgggatcgcgccgcacatcacccatctcaccggcatcaccaccgcc
atggtcaccggcgccccgcgcatcgaatccgtgctgcccgccttcctggagttcgcgcac
ggcgccgtgctggtcgcccacaacgcccggttcgacctgggcttcctcaaggccgcggcg
gcggccaccggaaccccgtggcccaagcccgcgtcgctgtgcaccgtccagctcgcgcgc
cgggtgctcacgcgggacgaggcaccgtcggtcaagttgagcgagctcgcgcgcctgttc
cgcaccgagaccacccccaaccaccgcgcgctcgacgatgcgcgcgccaccgtcgaggtg
ctgcacggactgatcggccgcgtcggcaacctgggcatccacacgctgggagagctgcgt
ggtcacctgccgtcggtcacgccgcagcagcgggccaagcgggtgctggccgaccacctg
ccggaacgcccgggcgtctacctgttccgcggcccgggggacgaggtgctctacgtgggc
acctcgcgcgacctgcggcgccgggtgcgcagctacttcacctcgggcgagacgcgcggc
cggatcaaggagatggtcgggctggccgagcgcgtggatcacgtcgagtgcgcgcacgcc
ctcgaggccgcagcgcgcgagctgcggctgatcgcagcgcacactccccagtacaaccgc
cgctcgaagtatccccggcgcggctggtggatccagctcaccgccgagccgttcccgcgc
ctggccgtccggcgctccgccaccgtcggcactccgtgcctcggcccgatccgatcccga
accgacgcggcggacctcgccgaactgctcgccgagacctgcggcctgcgcacctgcacc
acccgtctcctggccggcgcggcgcacacgtgcgccctggggcccgacggtgcgcgcccc
ctcggcggatgccacgcctccgtcgcgtcgcccgaaccggcggcgctgtaccgcccgcgg
gtcgagcgggccgcggcggcgctcaccggccggtcgtccgaggtgttcgatcgattgcag
gagcggctcgccgccctggccgaccgggagttcttcgagtccgcggcgcggctgcgcgac
cgcaccgcgcagctggtggacgtggtcgcccgctcccacgccctcgccgccttcgccgac
gtgccggagctgtcgctcgcccacccggacggcagcggcggttgggagctgtcgatcgtc
cggcacgggcggctggccgctgcgggcgtcgcaccgcggggtgtcccgccgatgccggtg
ttcgaccggctgcgcaccggggcggaatcggtctacgaggcggacgcggcgcccgacgtg
cccgacaccctgttccccgccgacgcgctgcacggcgcgagccccgaggaggcgtcgctg
ctgcggcggtgggcgctgcgcccgggcacccgcatcgtcgacgtgcagggcacgtggggc
gagccggcgcgcggcgcggggccgtgggtcgagtgggccgcgcgcgccgcggaggccggc
cgcgacgcacgtgccgcggcggcgggcccgcgcgcctccgggaggcaatacagtgaggag
gccacgcacgccgcgtga
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