Tsukamurella sp. PLM1: MTP03_35490
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Entry
MTP03_35490 CDS
T09545
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tsd
Tsukamurella sp. PLM1
Pathway
tsd03420
Nucleotide excision repair
tsd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MTP03_35490
03430 Mismatch repair
MTP03_35490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsd03400
]
MTP03_35490
Enzymes [BR:
tsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MTP03_35490
DNA repair and recombination proteins [BR:
tsd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MTP03_35490
MMR (mismatch excision repair)
Other MMR factors
MTP03_35490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BDH58610
LinkDB
All DBs
Position
complement(3225189..3227279)
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AA seq
696 aa
AA seq
DB search
MIEALDPEQQEAVLAPRGPVCVLAGAGTGKTRTITHRIAHQVSTGHVAAGQVLAVTFTSR
AAGEMRGRLRGLGIGGGDGQPGVQAVTFHAAAMRQLRYFWPRAIGDTRWELLDNKFPVIG
RAARDCDLRPETDTIRDLLSEIDWAKASLVTPETYAVAVEAAGRTAPMAPGTVADVYAAY
ERRKTDQDGNRLLDFDDLILVTAAIFEDNQVIAEEFRDRYRSFVVDEYQDVTPLQQQLLN
AWLGDRDDLTVVGDANQTIYSFTGATPNYLLDFTRRFEDATIVRLQRDYRSTPQVVALAN
KVIGAAQGRVAGTRLELIGQRPEGPAPIYAEVDDEPAEAKLVARRIRELLASGVPASEIA
ILYRINAQSAVHEAALTEAGIPYQVRGGSAFFERPEIGQAVRALMDRAGQFGGVSGSELL
ALVRGALEPLGLTEQQPDGARALERWQALDALVDLTTNLSAERPGLTLAELIGELRARAE
AKHPPTMQGVTLSSLHAAKGLEWDAVFLVGLTEGSVPISQAIAKGDPEPIEEERRLLYVG
VTRAREHLHLSWALARNEGGRKTRKRTRFLDVVAGQADAGRPRADSGPSKGKRRSSDICR
VCGGILDTREEKLRSRCDECPSDLNDDLVEALKIWRTGQARDQQIPPYTIFSNATLFAIA
EHQPRTRAQLVRINGIGSTKVEKYGDEVLALIAEHA
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaagcactggacccggagcagcaggaggcggtcctcgcgccgcgaggaccggtg
tgcgtgctggcgggcgcgggcacgggcaagacccgcaccatcacgcaccgcatcgcgcac
caggtgtccacggggcacgtcgccgccggccaggtcctcgcggtcaccttcacctcccgc
gccgcgggggagatgcggggccggctgcgcgggctcggcatcggcgggggcgacgggcag
ccgggtgtgcaggccgtcaccttccacgcggccgcgatgcggcagctgcggtacttctgg
ccccgcgccatcggggatacccgctgggaactgctcgacaacaagttccccgtgatcggc
cgcgccgcccgtgactgcgacctgcgcccggagacggatacgatccgcgacctgctcagc
gagatcgactgggcgaaggcgtcgctcgtcactcccgagacgtacgcggtggcggtcgag
gccgcggggcgcaccgccccgatggcgccgggcaccgtcgccgacgtgtacgcggcgtac
gagcggcgcaagacagaccaggacggcaaccgcctactggacttcgacgacctgatcctg
gtcacggcagcgatcttcgaggacaaccaggtgatagcggaggagttccgcgaccgctac
cgcagtttcgtcgtcgacgagtaccaggacgtcacgccgctgcagcagcagctcctcaac
gcctggctcggcgaccgcgacgacctcacggtggtgggggacgcgaaccagacgatctat
tcgttcaccggtgccaccccgaactacctgctggacttcacgcgccgcttcgaggacgcc
accatcgtccggctgcagcgcgactaccgctccacgccgcaggtcgtggcgctggcgaac
aaggtgatcggagctgcgcagggccgcgtggcgggcacccgcctcgagctcatcggccag
cgccccgaggggcccgccccgatctacgccgaggtcgacgacgagccggccgaggccaag
ctcgtcgcgaggcggatccgcgagctgctggcctcgggcgtcccggccagcgagatcgcg
atcctgtaccgcatcaacgcgcagtccgcggtccacgaagccgcgctcaccgaggccggc
atcccgtaccaggtgcgcggcggcagcgccttcttcgagcgccccgagatcggccaggcg
gtccgcgcgctgatggaccgcgcgggccagttcggcggcgtctccggcagcgagctgctc
gcgctggtccggggcgcgctcgagcccctcgggctcaccgagcaacagcccgacggtgcc
cgtgccctggagcggtggcaggccctcgacgcgctggtggatctcacgacgaatctgtcc
gccgaacgccccggcctcacgctggcggagctgatcggcgagctgcgcgcccgcgccgag
gcgaagcacccgcccacgatgcagggcgtcacgctctcgtcgctgcacgcggcgaagggc
ctggagtgggacgcggtgttcctcgtggggctcaccgagggctcggtgccgatctcgcag
gccatcgccaagggcgatcccgagccgatcgaggaggagcgccgtctgctgtacgtgggc
gtgacccgcgcccgcgagcacctccacctgtcgtgggcgctggcccgcaacgagggcggt
cgcaagacccgcaagcgcacccggtttctcgacgtcgtggccggccaggcggacgccggc
cggccccgcgcagactctggaccgagcaagggcaagcggcgcagctcggacatctgccgg
gtgtgcggcggcatcctcgacacccgcgaggagaagctgcgctcccggtgcgacgagtgc
ccgtcggacctcaacgacgatctcgtcgaggcgctgaagatctggcgcaccggccaggcg
cgggaccagcagatcccgccgtacacgatcttctccaacgcgacgctgttcgcgatcgcc
gagcaccagccgcgcacccgcgcacagctcgtgcggatcaacggcatcggctcgacgaag
gtcgagaagtacggcgacgaggtgctcgccctcatcgccgagcacgcctga
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