Tsukamurella sp. PLM1: MTP03_41730
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Entry
MTP03_41730 CDS
T09545
Symbol
groL_2
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tsd
Tsukamurella sp. PLM1
Pathway
tsd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tsd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MTP03_41730 (groL_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsd03019
]
MTP03_41730 (groL_2)
03110 Chaperones and folding catalysts [BR:
tsd03110
]
MTP03_41730 (groL_2)
03029 Mitochondrial biogenesis [BR:
tsd03029
]
MTP03_41730 (groL_2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tsd04147
]
MTP03_41730 (groL_2)
Enzymes [BR:
tsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
MTP03_41730 (groL_2)
Messenger RNA biogenesis [BR:
tsd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
MTP03_41730 (groL_2)
Chaperones and folding catalysts [BR:
tsd03110
]
Heat shock proteins
HSP60 / Chaperonin
MTP03_41730 (groL_2)
Mitochondrial biogenesis [BR:
tsd03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
MTP03_41730 (groL_2)
Exosome [BR:
tsd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MTP03_41730 (groL_2)
Exosomal proteins of other body fluids (saliva and urine)
MTP03_41730 (groL_2)
Exosomal proteins of breast cancer cells
MTP03_41730 (groL_2)
Exosomal proteins of colorectal cancer cells
MTP03_41730 (groL_2)
Exosomal proteins of bladder cancer cells
MTP03_41730 (groL_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BDH59234
LinkDB
All DBs
Position
complement(3791133..3792902)
Genome browser
AA seq
589 aa
AA seq
DB search
MLGQGGEARPFAHPAEVTRRAVRRGRRIDLEDVSKVWAEPAPIWRNHFAMAKIIAFDEEA
RRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAE
LVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVAAVSEHLL
KEAKEVETKEQIAATAGISAGDPAIGELIAEAMDKVGKEGVITVEESNTFGLQLELTEGM
RFDKGFISGYFATDAERQEAVLEDAYVLLVSSKISTVKDLLPLLEKVIQAGKPLAIIAED
VEGEALSTLIVNKIRGTFKSVAIKAPGFGDRRKAMLQDMAILTGGQVISEEIGLSLETAG
LEVLGTARKVVVTKDETTIVDGAGSQEQIAGRVSQIRAEIENSDSDYDREKLQERLAKLA
GGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALAQSGAVFEALALEG
DEATGAAIVKVALDAPVKQIAFNAGLEPGVVAEKVRNSPSGTGLNAATGVYEDLLTAGIN
DPVKVTRSALQNAASIAALFLTTEAVVADKPEKAGAPVDPTGGMGGMDF
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
gtgctaggtcagggaggtgaggcccggcccttcgcgcaccccgcggaggtgacacgccgg
gccgtccgtcgcgggcgccgaatcgacctagaagacgtgtccaaagtatgggccgaaccg
gcccctatctggaggaatcacttcgcaatggccaagatcatcgcgttcgacgaagaggcc
cgccgcggtctcgagcggggcctgaacgccctcgccgacgctgtcaaggtgacgctgggc
cccaagggccgcaacgtcgtgctggagaagaagtggggcgcccccacgatcaccaacgac
ggtgtttccatcgccaaggagatcgagctcgaggatccctacgagaagatcggcgccgag
ctcgtcaaggaggtcgccaagaagaccgacgacgtcgcgggcgacggcaccaccaccgcc
accgttctggcccaggcgctcgtgcgcgagggcctgcgcaacgtggccgcgggtgcgaac
ccgctgggcctcaagcggggcatcgagaaggccgtcgcggccgtctcggagcacctgctc
aaggaggccaaggaggtcgagaccaaggagcagatcgctgctaccgcgggcatctcggcc
ggcgacccggccatcggtgagctcatcgccgaggccatggacaaggtcggcaaggaaggc
gtcatcaccgtcgaggagagcaacaccttcggtctccagctggagctcaccgagggcatg
cgcttcgacaagggcttcatctcgggctacttcgcgaccgacgccgagcgtcaggaggcc
gtgctcgaggacgcctacgtgctgctggtgtcgagcaagatctcgaccgtgaaggacctg
ctgccgctgctggagaaggtcatccaggccggcaagccgctcgcgatcatcgccgaggac
gtcgagggcgaggccctgtcgacgctcatcgtcaacaagatccgcggcaccttcaagtcg
gtcgccatcaaggcccccggcttcggcgatcgccgcaaggcgatgctgcaggacatggcc
atcctcacgggcggccaggtcatctccgaggagatcggcctctcgctcgagaccgccggc
ctcgaggtgctgggcaccgcgcgcaaggtcgtcgtcaccaaggatgagaccaccatcgtc
gacggtgccggttcgcaggagcagatcgcgggccgcgtctcgcagatccgcgccgagatc
gagaacagcgactcggactacgaccgggagaagctgcaggagcgcctcgcgaagctggcc
ggcggcgtggccgtcatcaaggccggtgccgcgaccgaggtcgagctcaaggagcgcaag
caccgcatcgaggacgccgtgcgcaacgccaaggccgccgtcgaggagggcatcgtcgcc
ggtggtggcgtcgctctcgcgcagtcgggtgccgtgttcgaggctctcgccctcgagggt
gacgaggccaccggcgcggcgatcgtcaaggtcgcgctggacgcccccgtcaagcagatc
gccttcaacgccggcctcgagcccggcgtagtggccgagaaggtccgcaactcgccgtcc
ggcaccggcctcaacgccgccaccggcgtctacgaggacctgctgaccgccggcatcaac
gacccggtgaaggtcacccgctcggcgctgcagaacgcagcctcgatcgcggcgctgttc
ctcaccaccgaggccgtcgtcgccgacaagccggagaaggccggtgccccggtcgatccg
accggcggcatgggcggcatggacttctaa
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