Tsukamurella sp. PLM1: MTP03_43760
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Entry
MTP03_43760 CDS
T09545
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tsd
Tsukamurella sp. PLM1
Brite
KEGG Orthology (KO) [BR:
tsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsd03032
]
MTP03_43760 (topA)
03400 DNA repair and recombination proteins [BR:
tsd03400
]
MTP03_43760 (topA)
Enzymes [BR:
tsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MTP03_43760 (topA)
DNA replication proteins [BR:
tsd03032
]
Prokaryotic type
DNA Topoisomerases
MTP03_43760 (topA)
DNA repair and recombination proteins [BR:
tsd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MTP03_43760 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_C_rpt
Toprim_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
BDH59437
LinkDB
All DBs
Position
complement(3983459..3985915)
Genome browser
AA seq
818 aa
AA seq
DB search
MAARAKAAGGDGMQRLVIVESPAKGKKIGDFLGPNYTVRASMGHIRDLPSRDNPLPEADQ
GKPWARLGVDVDHEFEAHYVTSASKRSTVSELKSLLKQADELYLATDGDREGEAIAWHLR
EVLKPKVPVKRMVFHEITQQAILAAAQEPRELDMNLVDAQETRRILDRLYGYEVSPVLWR
KVNQGLSAGRVQSVATRIIVDRERERIAFRTAGYWDIAAQLDAGAEASPRTFGARLVTVD
GDRVATGRDFDAQGNLKKPSGTTVLDGARANALVAGLQGASLTVTSVEEKPYTRKPYAPF
MTSTLQQEASRKLRFNTDRTMQIAQRLYEGGYITYMRTDSTTLSETAIAAARDQARQLYG
AEYVHPTPRQYTRKVKNAQEAHEAIRPAGETFQTPGALASVLNSDEFRLYELIWQRTVAS
QMADVKGTTLSLRIAGTASSGENCEFAASGRTITFPGFLAAYVETVDDQVGGEADDAESR
LPQLVKGQAVTAAELAAADHVTSPPARYTEASLVKTLEELGIGRPSTYASIIKTIQDRGY
VVKKGNALVPQWVAFAVIGLLEGHFGGLVDYNFTASMEDDLDEIAGGREGRVDWLTRFYF
GDGGPEDDGAAVAGADGPGPDSPGLKNLVAANLDAIDAREINSIPLYTDADGNVVYVRVG
RYGPYLERTVGPKEGETEPQVQRANILASMTPDELTEEVAEKLFATPQDGRPLGVDPATG
HEIVAKEGRFGPYVTEILPAPEEDSEAENLDEPGTTKTRRKKKTDAPKPRTGSCSRRWTS
RPSRSRTRCGCCRCPASWASIRSPRRRSPPRTVATGRT
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacgtgcgaaggcagcgggcggagacggtatgcagcgcctggtgatcgtggag
tcccccgccaagggcaagaagatcggcgacttcctcgggcccaactacaccgtgcgcgcg
tcgatgggccacatccgcgacctgccgagccgggacaacccgctccctgaggccgaccag
ggcaagccctgggcgcggctcggggtcgacgtggaccacgagttcgaggcccactacgtg
acctccgcgagcaagcgctccaccgtctccgagctgaagtccctgctcaagcaggccgac
gagctctacctcgcgacggacggtgaccgcgagggcgaggccatcgcgtggcacctgcgg
gaagtgctcaagccgaaggtcccggtcaagcggatggtgttccacgagatcacccagcag
gccatcctcgccgccgcgcaggaaccccgcgagctcgacatgaacctcgtggacgcgcag
gagacccgccgcatcctcgaccgcctgtacggctacgaggtcagccccgtgctgtggcgc
aaggtcaaccagggcctttcggccggccgcgtccagtccgtcgcgacccgcatcatcgtc
gaccgggagcgcgagcgcatcgccttccgcaccgccgggtactgggacatcgccgcgcag
ctcgacgccggcgccgaggccagcccgcgtaccttcggcgcgcgcctggtgaccgtcgac
ggcgaccgggtcgccaccggccgcgacttcgacgcgcagggcaacctcaagaagccgtcc
gggaccaccgtgctcgacggtgcccgggcgaacgccctggtggcaggcttgcagggcgcc
agcctgacggtgacctccgtcgaggagaagccgtacacccgcaagccctacgcgccgttc
atgacgtcgacgctgcagcaggaggccagccgcaagctgcgcttcaacaccgaccgcacc
atgcagatcgcgcagcggctctacgagggcggctacatcacctacatgcgtaccgactcg
accactctgtcggagaccgccatcgccgccgcccgggaccaggcgcggcagctgtacggc
gccgagtacgtgcacccgaccccgcggcagtacacccgcaaggtcaagaacgcgcaggag
gcgcacgaggcgatccgccccgcgggcgagaccttccagacgccgggcgcgctcgcgtcc
gtattgaactcggacgagttccggctctacgagctgatctggcagcgcaccgtcgcctcg
cagatggccgacgtcaagggcaccaccctgagcctgcggatcgccggcaccgcgtcgtcg
ggcgagaactgcgagttcgccgcgtccggccgcaccatcacgttcccgggctttctcgcc
gcgtacgtcgagaccgtcgacgaccaggtgggcggcgaggcggacgacgccgagtcgcgc
ctgccgcagctggtgaagggacaggctgtcacggccgccgagctggcggccgccgaccac
gtgaccagcccgccggcccgctacaccgaggcgtcgctggtcaagaccctcgaagagctg
ggcatcggccgaccgtcgacctacgcgtcgatcatcaagaccatccaggaccgcggctac
gtcgtgaagaagggcaacgccctcgtcccgcagtgggtggcgttcgccgtgatcggcctg
ctggagggccacttcggcggcctcgtcgactacaacttcaccgcgtccatggaggacgat
ctcgacgagatcgccggtggccgcgagggccgcgtcgactggctcacccgcttctacttc
ggtgacggcgggcccgaggacgacggcgcggccgtcgccggggccgacggaccgggaccc
gacagccccggcttgaagaacctcgtcgcggcgaacctggacgcgatcgacgcgcgtgag
atcaactcgatcccgctctacaccgatgccgacggcaacgtcgtctacgtgcgtgtgggg
cgctacgggccgtacctggagcgcaccgtcgggcccaaggaaggcgagacggagccccag
gtccagcgggccaacatcctggcgtcgatgacgccggacgagctgaccgaggaggtcgcg
gagaagctcttcgccaccccccaggacggccgcccgctcggcgtcgacccggccaccggc
cacgagatcgtcgccaaggagggccgtttcggcccttacgtcaccgagatcctgcccgcg
ccggaggaggactccgaggccgagaacctcgacgagccgggcaccaccaagacgcggcgc
aagaagaagaccgacgcgccgaagccgcgcactggctcctgctcaagacgatggacatcg
agaccgtcacgctcgaggacgcgctgcggctgctgtcgctgccccgcgtcgtgggcgtcg
atccggagtccaaggaggagatcaccgcccagaacggtcgctacgggccgtacctga
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