Thiosulfatimonas sediminis: THMIRHAS_02700
Help
Entry
THMIRHAS_02700 CDS
T06859
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
tse
Thiosulfatimonas sediminis
Brite
KEGG Orthology (KO) [BR:
tse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tse03016
]
THMIRHAS_02700 (truD)
Enzymes [BR:
tse01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
THMIRHAS_02700 (truD)
Transfer RNA biogenesis [BR:
tse03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
THMIRHAS_02700 (truD)
Prokaryotic type
THMIRHAS_02700 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
BBP44897
UniProt:
A0A6F8PS85
LinkDB
All DBs
Position
304900..306015
Genome browser
AA seq
371 aa
AA seq
DB search
MSSNTHSPVDFSSLAYANGAPQIKADFKVLAEDFQVQEQHAYSLSGEGEHLWLYLQKCGE
NSEWMAKQIAKWAGVPRSAVGMAGQKDRHAVTQQWLSVHLPGKPDPDWSQWTYPQVQLLD
SMRHNRKLQTGGLSGNRFSLRLRNLRQLTDGAIDNTLQVIADLSIRLEQIKLGVPNYYGE
QRFGKNGANIPNAVQMLLQGKRVPREKRSLYLSALRSWAFNRYLAQRITADNWNQYVVGD
IFQLQGSSRCFSDDGSADLESRLAQGDIHPVGLLIGEIGVKLLQPSAAAEQLQAAWISEF
STWQQALSDARVAADYRALRLIPQDLQWQWLPDAQAQTLDLQLQFTLPAGTFATMLLREL
LVAVEPTRQFA
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcaaacactcattctccagttgatttttcctcacttgcttatgccaatggggcg
ccacaaattaaagccgattttaaagttcttgctgaagattttcaggtgcaagagcagcac
gcctatagcttaagcggcgaaggtgagcatctttggttatatctgcagaaatgcggtgaa
aacagcgaatggatggcgaaacagattgcaaaatgggcgggggttccacgttctgcggtt
ggtatggccggacagaaagacaggcacgcggtaacccaacagtggcttagtgtgcatctg
ccaggcaagcccgatccggattggagtcagtggacttatccacaagtacaattgctggac
agtatgcgccataaccgtaagctgcaaaccggaggtctcagtggtaatcgttttagtttg
cgtctgcgtaatttgcgtcaacttacggatggtgcaatcgataatacgttgcaagtgatt
gccgatctcagtatccgtttagagcagattaagttaggcgttccgaattattacggcgag
cagcgcttcggtaaaaatggggcgaatattccgaacgctgtgcaaatgttgttgcaaggt
aagcgagtaccacgcgagaaacgaagcttgtatctgtcggcgctgcgttcttgggctttt
aatcgttaccttgcacagcgaattactgccgataattggaatcaatatgtggttggggat
atctttcagttacaaggctctagtcgttgttttagcgatgatgggagtgctgatttagag
tcgcgtttggcgcagggcgatattcatccagttggtttgttgattggcgaaataggggtg
aaactattgcaacccagtgcggcagctgagcagttacaagcggcttggataagcgaattt
agcacttggcagcaagcgctgagtgacgcccgagtggcagccgattatcgggcgctacgc
cttattccacaagacttacagtggcaatggttgccagatgctcaggcacaaacgctggat
ttgcagttgcaatttacgttgccggcgggtacgtttgcaacaatgttattgcgtgagctt
ttggttgcagttgaaccgacgcgacaatttgcataa
DBGET
integrated database retrieval system
