Thiosulfatimonas sediminis: THMIRHAS_02720
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Entry
THMIRHAS_02720 CDS
T06859
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tse
Thiosulfatimonas sediminis
Pathway
tse03030
DNA replication
tse03430
Mismatch repair
tse03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
THMIRHAS_02720
03430 Mismatch repair
THMIRHAS_02720
03440 Homologous recombination
THMIRHAS_02720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tse03032
]
THMIRHAS_02720
03400 DNA repair and recombination proteins [BR:
tse03400
]
THMIRHAS_02720
Enzymes [BR:
tse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
THMIRHAS_02720
DNA replication proteins [BR:
tse03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
THMIRHAS_02720
DNA repair and recombination proteins [BR:
tse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
THMIRHAS_02720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
YbjQ_1
Motif
Other DBs
NCBI-ProteinID:
BBP44899
UniProt:
A0A6F8PS13
LinkDB
All DBs
Position
complement(306602..307681)
Genome browser
AA seq
359 aa
AA seq
DB search
MSNAQLILIDKRNQPLKEYIVAVAASDGLNIKGVEIMASPAKGETSLLNAQVLIPPLEAF
DFDMKKLVNATLNAVSVKDEIMTVDEFIAQCSEDEAVRDALSKSVPKLRKKIEALLKEFL
DSEVIPLILERRNDVLYKLKEHAKELKGKKIVCIDIEATNISTDPQADIIQLSACDGEGK
TLFNQLINPGYDIPENEKHNITTEMVQGEPLLGHVWDEIHDQLRDADVVLAYSTESDFMY
LEKSAEKKMLRFELDYNKWLDVAELSRDLNGAIRWHSERMYWFYKTPKLTASYEQVLGKP
FPGDAHDALADAVATIELFNAMLDKGRKSQIEEKKKPKQVSDIITNNPFAAAFANAKRS
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgcacaactgattctgattgataaacgcaaccaaccgctgaaagaatacatc
gtcgcggtggcggcttccgatggcttaaacattaagggtgtggagatcatggcgtctccg
gccaaaggcgaaacatcgctactgaatgcacaggtgttaattccgcctttggaagcgttt
gattttgatatgaaaaagctggttaacgcaaccttgaacgccgtcagtgtgaaagacgaa
atcatgaccgtggatgagtttatcgcgcaatgttccgaagatgaagctgttcgcgacgcg
ctaagcaaatctgtgccgaaattgcgcaaaaaaatcgaagctttattaaaagagtttctg
gattcagaagtgattccgttaattttagaacgccgcaacgacgtgctttataaactcaaa
gaacacgctaaagaactcaaaggcaaaaaaattgtctgcatcgatatcgaagcgacgaat
atctcgactgatccacaagccgacattatccaactgtctgcttgcgatggcgaaggcaaa
acgttatttaatcaattgattaatccaggctatgacatccccgaaaatgagaaacacaat
atcaccacggaaatggtgcagggtgagcctttgttagggcatgtatgggatgaaattcat
gaccaactgcgcgacgccgatgtggttttggcctacagtaccgaaagcgattttatgtat
cttgaaaaaagcgccgaaaagaaaatgctgcgttttgaattagactataacaaatggctg
gatgtggctgaactgagtcgcgatttaaacggtgccattcgttggcattctgagcgcatg
tactggttttataaaaccccaaaactgacggcttcttatgaacaagttcttggcaagccc
tttccaggtgacgcgcatgacgcactagcggatgctgttgcaaccatcgaattgttcaac
gccatgctcgacaaggggcgtaaatcacaaatcgaagaaaagaaaaaaccgaaacaagta
agtgacatcatcaccaataatccgtttgcggcggcgtttgccaacgccaaacgtagctaa
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