Thiosulfatimonas sediminis: THMIRHAS_03580
Help
Entry
THMIRHAS_03580 CDS
T06859
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tse
Thiosulfatimonas sediminis
Pathway
tse03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
THMIRHAS_03580 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tse03400
]
THMIRHAS_03580 (ung)
Enzymes [BR:
tse01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
THMIRHAS_03580 (ung)
DNA repair and recombination proteins [BR:
tse03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
THMIRHAS_03580 (ung)
Prokaryotic type
THMIRHAS_03580 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BBP44985
UniProt:
A0A6F8PS91
LinkDB
All DBs
Position
complement(388802..389542)
Genome browser
AA seq
246 aa
AA seq
DB search
MSEIKLSAGWQNHLQSELERAYMQQLCAMLQQQSEQGETILPPASQRFNALNATPLESVK
VVILGQDPYPTPGHAHGLCFSVLPSVKPLPKSLNNINQELLDDLGIDNRHSGFLQPWAEQ
GVLLLNSVLSVQAGKANSHQGQGWERFTDKIIELVNQHCEHCVFILWGNYAQKKGAKIDA
QRHLVIKTAHPSPLSAYRGFFGSKPFSQSNQYLQQHGKTPINWQLPLAQAQQPLPLHPVD
ASQSQQ
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaatcaaattaagcgccggctggcaaaaccatttacaaagcgaattggagcga
gcttatatgcagcagctttgcgcaatgctgcaacaacaaagcgaacaaggtgagacaata
ctgccgccagcatcacagcgctttaatgcgctcaatgcgacgcctctggagtcagtcaaa
gtggtgattctcggccaagacccctaccccacacctggacacgcccacggattgtgtttt
tcggttttacccagtgtaaaacccttgccgaaatcactgaacaatatcaatcaggaactg
cttgatgatttgggcatagataatcgccacagcggttttttacaaccttgggctgaacag
ggcgtgttgctgttgaattcagtgttaagcgtgcaagccggcaaggccaattcgcatcaa
ggacaaggctgggagcgttttaccgataaaattatcgagctcgtcaatcagcactgcgaa
cactgtgtgtttattttatggggtaattatgcacaaaagaaaggcgctaaaatcgacgca
cagcgtcacttggtgattaaaaccgcacacccctctccgttatcggcgtatcgtggtttt
tttggcagtaaaccattttcgcaaagcaaccaatatctccagcaacatggcaaaacaccg
attaattggcagctgcctctggcacaggcgcaacaaccgttgccacttcatccggtagac
gcgtcacaaagccagcagtaa
DBGET
integrated database retrieval system
