Thiosulfatimonas sediminis: THMIRHAS_04080
Help
Entry
THMIRHAS_04080 CDS
T06859
Symbol
nifA-2
Name
(GenBank) Nif-specific regulatory protein
KO
K02584
Nif-specific regulatory protein
Organism
tse
Thiosulfatimonas sediminis
Pathway
tse02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
tse00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
THMIRHAS_04080 (nifA-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tse03000
]
THMIRHAS_04080 (nifA-2)
Transcription factors [BR:
tse03000
]
Prokaryotic type
Helix-turn-helix
Other families
THMIRHAS_04080 (nifA-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF_2
GAF
AAA_5
Mg_chelatase
AAA_2
GAF_3
MCM
AAA_19
Motif
Other DBs
NCBI-ProteinID:
BBP45035
UniProt:
A0A6F8PSE1
LinkDB
All DBs
Position
445274..446959
Genome browser
AA seq
561 aa
AA seq
DB search
MPDSLDIANHSEYIVIRQAAEQIERAHKPEEAITDILSLISRQMGLNRGRVLLHDKSDSV
LYAAYSFGLTDLEVSRSRFADNEGISGKVMKMGSPVIIPNIDLEDDYLCRTVARSTLPQE
TVAFIATPILRKGKNIGVLAVNRLRNRSRSLDRDLGILKLIALFIGEILAVNELIEKQTQ
VLKEENEQLRAMAVSQGSQYGIIGESPAVMASLNKAARAANVSVTVLLKGESGTGKEKFS
RMLHMASNRQDGPFIAINCAAIPLELLESELFGHEKGAFTGATATKPGKIEMANKGTLFL
DEIGDLDLGLQAKLLRVLEERSITRIGSNKAIPVDVRIIVASHKNLQESVNQGNFRLDLF
YRLNVFPIELPALRERDGDIRLLARHFLNQANQEYHTNVIFDRGALEFLERYEWPGNIRQ
LENVIKRAVLLAEDGQMITDRLIQRIIREESGIVFNENTPPPAAISAPEAVNAAASRVGA
MPPLTVAETVHYAQAMPPTPPPNAFNADSEIKRNYWKVSDSEKDLLLQALERAHGNKSHA
ARMLNMTPRQYNYRYKKLGLG
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgcctgattcactggatatagcaaaccattctgagtacatcgtgattcgacaagccgca
gaacagatcgagcgtgcgcacaagccggaagaggcgattaccgatattttgagtttgatt
tcgcggcagatggggcttaaccgtggtcgcgtgctgttgcatgataaaagcgattccgtg
ctctatgctgcttactctttcgggttaaccgacttggaagtttcgcgtagccgttttgcc
gataacgaagggattagcggcaaggtaatgaaaatgggttcaccggtgattattccgaat
atcgatttggaagacgattacctgtgccgtacggtggcacgttcgaccctaccgcaagaa
acggttgcctttatcgccacgccgattttgcgcaagggtaagaacatcggtgtattagcg
gtcaaccgcttgagaaaccgttcgcgttccttggacagagatttaggtattcttaaattg
attgctctgttcattggggaaattcttgcggtgaatgaactgattgaaaaacagacgcag
gtgctgaaagaagagaatgaacagttgcgtgccatggcggttagccaaggcagtcaatac
ggtattatcggcgaaagtccggcggtcatggcatcgttgaacaaagccgctcgcgccgcc
aatgtgtcggtgacggtattgctgaagggcgaatcaggaaccggtaaagaaaaattctcg
cgcatgttgcacatggcgtccaatcgtcaggacggcccttttatcgccatcaactgtgct
gcgattccgttggaattgttggagtcagaattgttcggccacgaaaaaggggcttttacc
ggcgccaccgcgactaagccaggtaaaatcgaaatggccaataagggcacgctcttcttg
gatgagatcggtgatcttgatttagggttgcaggccaagttactgcgcgtattggaagag
cgcagtattacgcgtatcggctcgaataaagcgattccggtggatgtacggattattgtt
gcctcgcacaaaaacctgcaagagtcggtcaaccaaggtaatttccgactggatttattc
tatcgtctgaatgtgtttccgattgaattgccggcgctgcgtgagcgagatggcgatatt
cgtctgctggcgcgtcacttcttgaatcaggcaaatcaggaatatcacaccaatgttatt
tttgatcgcggggcactagagtttctagagcgctatgaatggccggggaatatccgtcag
ttagagaacgtgataaagcgcgcggtattgttggcggaagatggacagatgatcaccgat
cgcttgattcagcgaatcatccgtgaagaaagcgggattgtctttaatgaaaatacgccg
ccgccggccgcaatttccgcgccggaagctgtaaacgcagcagcttctcgggtgggcgcg
atgccgccgctaaccgttgcggaaacagtacattatgcgcaagcgatgccgccaacccct
ccgcctaacgcttttaacgctgacagtgaaatcaagcgtaattattggaaggtaagcgat
tctgagaaggatttattgctacaggcgctggaaagagcgcatggcaataaaagccatgcc
gcacgtatgcttaatatgacgccaaggcaatacaattaccgttataaaaaacttggactc
ggttag
DBGET
integrated database retrieval system
