Thiosulfatimonas sediminis: THMIRHAS_06610
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Entry
THMIRHAS_06610 CDS
T06859
Symbol
wbpM
Name
(GenBank) nucleotide sugar epimerase/dehydratase WbpM
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
tse
Thiosulfatimonas sediminis
Pathway
tse00541
Biosynthesis of various nucleotide sugars
tse00552
Teichoic acid biosynthesis
tse01100
Metabolic pathways
tse01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
tse00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
THMIRHAS_06610 (wbpM)
00552 Teichoic acid biosynthesis
THMIRHAS_06610 (wbpM)
Enzymes [BR:
tse01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
THMIRHAS_06610 (wbpM)
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Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
CoA_binding_3
PglD_N
NAD_binding_10
NAD_binding_4
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
BBP45288
UniProt:
A0A6F8PTF3
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All DBs
Position
725505..727394
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AA seq
629 aa
AA seq
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MNKPLFSLLSLSRFHKRVISVLIDVFGLVIASYLAICIRFGEASHIEPYLLSISILVLIA
IPVFIYQGLYRAVIRYIGHKFANTVFFTVSTVFVLWTSTLFMLDLPFPRTAILIDWLLVL
LFIAATRLIARRLLFSVAQAKTEKHPRQNIVIFGAGSSGRQLFNAILKIPHIYAVGFIDD
DKNLQNQEISCARVYKRDDLAYLIDKYQVTDVFLAIPSLKASQRKDVIEWLEPFQVKVSS
VPGIDEIVSGKIRFSDIREVDIGDLLGRDVVGPHPDLLAKCIAGQSVLVTGAGGSIGSEL
CRQILAQRPKRLVLLELSEFALYSIDKELTKLSQDSACELIPVLGSVRDELKLKRLLVLY
GVDTVYHAAAYKHVPIVEHNLQEGIFNNTFGTHTTAKAAGEVGVKNFVLISTDKAVRPTN
VMGASKRMAELALQALQPVYPKTHYSMVRFGNVLGSSGSVIPLFRKQISNGGPVTVTHPE
MTRYFMTIPEAASLVIQAGSMGVGGEVYVLDMGDPVKIDLLARKIIRLSGLEVMDSDGHG
DIEICYTGLRPGEKLYEELLIGDNPDGTEHPRIMKANEYSISYIEFTDALHHLEVLLENQ
DYVGLLEAIGTVVKGFQHTGEIVDYSIKP
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaacctcttttctcgctactttctctttctcgttttcataagcgtgtcatttcg
gttcttattgatgtattcggtttggtgattgcatcttacttggctatttgtattcggttt
ggtgaggcttctcatattgaaccgtatttattgtcgatttctatattggtgttaattgca
attccggtatttatttatcaagggttgtatcgcgcggttattcgttatatcggacataag
tttgctaatacggtcttttttacggttagtacggtttttgtgttgtggacgtcgacgctg
tttatgttggatttgccatttccgagaacggcgattctgattgattggttgttagtgttg
ctttttattgcagcgacgcgattgattgctaggcgtttattattttctgttgctcaggca
aaaacggaaaagcatccgcgccaaaacattgtgatttttggtgcgggttcgtctggccgg
cagctttttaatgcgattttaaaaattccacacatttatgcggtgggttttattgatgat
gataaaaatctgcaaaatcaagaaattagttgcgcgcgtgtttataagcgtgatgatttg
gcctatttgattgataagtatcaggtgacggatgtttttttggcgattccgtctttaaag
gcatcacagcgtaaagatgtgattgagtggttggagccgtttcaggtaaaagtgtcttcg
gtaccggggattgatgagattgtttctggcaagattcgtttttctgatattagagaggtt
gatatcggggatttgttaggccgagatgtggttggcccgcatcctgatttgttggcgaaa
tgcattgctggacaaagtgtgttagtcactggtgcaggcggttcgatcggttctgaattg
tgtcgccaaattttggctcagcggccgaagcgtctggttttgctggagttaagtgagttt
gctctttattcaattgataaggagttgactaaattaagccaggattcggcctgcgaactg
attccggttttaggcagtgttcgtgatgaacttaagttaaagcgcttattggttttgtac
ggtgttgacactgtttatcatgcggctgcttataagcatgtgcctattgtggagcataat
ttacaagagggtattttcaataacacatttggtactcataccactgccaaggccgcaggt
gaagttggggttaagaattttgtattgatttcaaccgataaagcagtgcgtccaacgaat
gtgatgggggcgagtaagcggatggcggaacttgcgttgcaggctttgcaaccggtgtat
cccaaaacgcattacagtatggtacgttttggcaatgtattgggttcttctggatcggtt
attccgttattccgcaagcagatttcgaatggcgggccggttaccgtgactcatcctgaa
atgacgcgttattttatgaccattcctgaagcggcttcgctggttatccaagcgggttcg
atgggggttggcggtgaagtctatgtgttggatatgggtgatccggtaaaaattgatttg
cttgcccgtaagataattcgactttctggactggaagtgatggattcggatggtcatggt
gatattgagatttgttataccggtttacgcccaggtgagaagctttatgaggagttgctt
attggtgataatccggacggtacggagcaccctcgtattatgaaagcaaatgaatattcg
atctcctatatagaatttaccgatgcattgcatcatttagaagtgttgcttgaaaatcag
gattatgttggtttattagaggcaattggcacggttgtgaaagggtttcagcataccggt
gaaatcgttgattattcaatcaaaccatag
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