Thiosulfatimonas sediminis: THMIRHAS_06960
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Entry
THMIRHAS_06960 CDS
T06859
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
tse
Thiosulfatimonas sediminis
Pathway
tse02024
Quorum sensing
tse03060
Protein export
tse03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
tse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
THMIRHAS_06960 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
THMIRHAS_06960 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
THMIRHAS_06960 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
tse02044
]
THMIRHAS_06960 (ffh)
Enzymes [BR:
tse01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
THMIRHAS_06960 (ffh)
Secretion system [BR:
tse02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
THMIRHAS_06960 (ffh)
Eukaryotic Sec-SRP protein
THMIRHAS_06960 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
Zeta_toxin
cobW
AAA_33
ArsA_ATPase
KTI12
ABC_tran
AAA_16
Thymidylate_kin
APS_kinase
AAA_31
AAA_14
AAA_30
Helicase_RecD
YqeC
TctA
nSTAND3
T2SSE
VirC1
TsaE
AAA_28
ATP_bind_1
dsDNA_bind
Motif
Other DBs
NCBI-ProteinID:
BBP45323
UniProt:
A0A6F8PT63
LinkDB
All DBs
Position
761083..762471
Genome browser
AA seq
462 aa
AA seq
DB search
MFDNLSDRLNRTLKSLKGQGRLTESNIKDALRDVRRALLEADVALTVVKSFVAKVQERAI
GQEVSTSLNPGQAFIKIVKDELTAVMGDAASPLNFNVEPPAVIMMAGLQGAGKTTSVAKL
AKWLTEREKKKVMVVSADVYRPAAIKQLETLAAQIGVDFFPSSAEQDPVDIARNAHAEAR
KRFADVLILDTAGRLHIDDAMMGEIQHLHAAIKPVETLFVVDAMTGQDAANTAKAFNDAL
PLTGVILTKTDGDARGGAALSIREITGKPIKFLGAGEKTDALEPFHPERMAGRILGMGDV
LSLIEEAEAKIDKQKAEKFAQKLQKSGQFDLEDFLEQLQQINNMGGIGGMLGKIPGMGQL
KGQVDNAVAEKEFSRLAAMIHSMTPQERRFPAVIKGSRKRRIAMGSGTSVQDVNKLLKQF
TQMQKMMKKVSKGGMKNMLRGLGGKLPPGMGGMGGGLPPGMR
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataatttatccgatcgtttaaaccgcacgttaaagtcgctaaaaggccaaggg
cgtttaacagaatcgaatattaaagatgctttgcgtgatgtgcgtcgtgctttattggaa
gcggacgtggcgctgacggtggtcaagtcgtttgtcgcaaaagtacaagaacgtgccatt
ggacaagaggtttcgacaagcctaaaccctgggcaagcgtttattaaaattgtaaaagat
gagttgactgcggtgatgggtgatgccgcatcgccgcttaattttaatgttgagccacct
gcggtcattatgatggccggtttgcagggcgcggggaaaaccacgtcggtcgctaagttg
gcgaaatggctaaccgagcgtgaaaagaaaaaagtcatggtggtttcggcggatgtttat
cgtccggcggcaatcaagcagttagaaaccttggctgctcaaattggtgttgattttttc
ccgtccagtgccgaacaagatccggtggacatcgcgcggaatgcgcacgccgaagcgcgt
aaacgctttgctgatgtattgattttggataccgcaggtcgtctgcacattgatgatgcg
atgatgggtgaaatccagcatttgcacgcggcaattaaaccggtcgaaaccctgtttgtg
gttgatgccatgaccggtcaggatgccgctaataccgcgaaagcctttaatgatgctttg
ccgttgacaggggtcattttgaccaaaaccgatggcgatgcccgcggtggtgccgcgctg
tcgattcgtgaaatcactggtaaaccgattaagtttttaggtgccggtgagaagaccgat
gcgcttgaaccgtttcatccagagcgcatggccgggcgtattttgggaatgggcgatgta
ctgagtcttatcgaagaagcagaagcgaaaatcgataaacaaaaagccgaaaagtttgcg
caaaagttgcagaaatccggacagtttgatttagaagactttttggagcaactccagcag
attaataatatgggcggcattggcggaatgctcggtaagattccggggatgggtcagcta
aaaggccaagtggataatgcggttgcggaaaaagagttcagtcggttggcggcgatgatt
cattcgatgacgccgcaggaacgccgtttcccagcagtgattaaaggctctcgcaaacgt
cgaattgcgatggggtcagggacgtcggtacaagatgtgaataaacttctgaaacagttt
actcaaatgcagaaaatgatgaaaaaagtctctaagggtggcatgaagaatatgttgcgc
ggtttgggcggaaaactacctcccggtatgggcgggatgggtggcggactcccaccaggg
atgcgttaa
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