Thiosulfatimonas sediminis: THMIRHAS_08480
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Entry
THMIRHAS_08480 CDS
T06859
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
tse
Thiosulfatimonas sediminis
Pathway
tse03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
THMIRHAS_08480 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tse03019
]
THMIRHAS_08480 (pcnB)
Enzymes [BR:
tse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
THMIRHAS_08480 (pcnB)
Messenger RNA biogenesis [BR:
tse03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
THMIRHAS_08480 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
BBP45475
UniProt:
A0A6F8PTM9
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All DBs
Position
931612..933057
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AA seq
481 aa
AA seq
DB search
MHSFIRKISAFFSSPKPVTAEDHQPPFVLSRDDHNISRDDIDRAALDVLYPLKRAGYDAY
LVGGCVRDLLLGLEPKDFDVVTNAEPEQVKQVFQRRCQLIGRRFRLAHVRFGRNIIEVAT
FRGHDQTAPQARGRFFGRKKFAQTREVDESGRLLQDNIYGSIEEDVWRRDFTVNALYYSV
KDYSILDYTHQGIEDIEKGLIRLIGDPQTRYREDPVRMIRAVRFAAKLGFRIEKQSEAPI
RELAPLLSDVSNARMFEEVLKLFHSGVAVQVFEKLRHYGLFEHLFPQTEKVLEQESEGFP
RMLVIEALKSTDERIRSGKSVNPAFLFSALLWEPMQQRKQALMDQGEVHQNALFAAANEV
IEQQIKQTAIPKRFTAQIREIWSLQYRLPKRHGDKAQELLEHPRFRAAYDFLGIRVAAGE
TAEQHLFDWWTEYQEKTPVERVAFASDLKPQHKRKRRPPRRNRNFFRKRSQNGESSAPKD
S
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcacagttttatccgaaaaataagcgcctttttttccagccctaagcccgtgacagct
gaggatcatcaaccacccttcgttttaagtcgagacgaccacaatatttcccgcgatgac
attgatcgtgccgctttggatgttctttatccgttgaagcgcgccggctatgatgcctat
cttgtcggtggttgtgtgcgcgatttactcttagggcttgagccgaaagattttgacgtt
gtcaccaatgccgagcctgaacaagttaagcaggtattccagcgacgctgccaattaatt
gggcgacgctttcgtttagcgcacgttcgttttggtcgtaatattattgaagtagctacc
ttccgaggtcatgatcaaacggcaccgcaagcgcgtggtcgatttttcggtcgcaaaaaa
tttgcgcaaacgcgcgaagttgatgagagtggacgtcttctgcaagacaatatttacggc
agcattgaagaggacgtctggcgtcgtgattttacggtaaacgcactctattacagcgtg
aaagattattcgattcttgattacactcatcagggaattgaagacattgaaaaaggtctg
atacgtctgattggtgatccgcaaacgcgttatcgagaagatcctgtacggatgattcgc
gctgtacgttttgcagcaaaattaggctttagaattgagaagcaatcggaagcaccaata
cgtgaactcgcgcctttgctgagcgatgtctctaatgcccgaatgtttgaagaagtgctt
aaacttttccatagcggtgttgcggtccaggtttttgaaaaattacgtcattacggactt
tttgagcatctgttcccgcaaactgaaaaagtgctagagcaagaaagtgaaggctttccg
aggatgttggtcattgaggcattgaaaagcactgacgagcgtattcgttcaggtaaaagt
gtgaatccggcgtttttgttttccgctttgctttgggagccaatgcagcaacgtaagcaa
gcgttgatggatcaaggtgaagtgcatcaaaatgcgttgtttgctgccgcgaatgaagtg
atcgagcaacagattaaacagacagcgatacctaaacgcttcactgcccaaattcgcgag
atttggagtttgcaatatcgtctgccaaagcgtcatggtgacaaggcgcaagagttgtta
gagcatccgcgttttcgtgcggcttacgattttcttgggattcgcgttgccgccggagag
acggccgagcagcatctttttgactggtggacggaatatcaagaaaaaaccccggttgaa
cgtgtcgcttttgcctcagatttaaagccacagcataagcgcaaacgtcgtccaccgcgt
cgtaaccgtaatttcttccgtaaacgtagccaaaatggcgaaagttcagcgcctaaagat
tcgtga
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