Thiosulfatimonas sediminis: THMIRHAS_11170
Help
Entry
THMIRHAS_11170 CDS
T06859
Name
(GenBank) lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
tse
Thiosulfatimonas sediminis
Brite
KEGG Orthology (KO) [BR:
tse00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tse01011
]
THMIRHAS_11170
Enzymes [BR:
tse01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
THMIRHAS_11170
Peptidoglycan biosynthesis and degradation proteins [BR:
tse01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
THMIRHAS_11170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Motif
Other DBs
NCBI-ProteinID:
BBP45744
UniProt:
A0A6F8PUQ0
LinkDB
All DBs
Position
complement(1236446..1238338)
Genome browser
AA seq
630 aa
AA seq
DB search
MSAQAQPLSIEQKAYIDAYEAIKRNDRAAIASYKQQLQNYTLYPYVLYHDYRVNIDSTPP
RVIEFFLNRYQDLYLSDKLRTHWLKHLAATKQWPEYLLHYTPQNSQSLQCNFYHASIAFG
TDAQKEKAISAAQQLWQSLIEIPEACVSVETALRNQKKFTAQMVWNRITLLIQKKQFSRA
QDASKDLSNADKKVVNAWINIVRNPNLTSKEITTISGFARKEAFIQAVPYLASQNPQLAQ
SALAEFAEPYGLNQSQRIDIQRKIALRSAYRYQEEAKALLENVNTQGNGSEETIRWQAQI
ALRNSRWIDLLDTIELMSKEEQDSNQWRYWRARALEARGDQKTAHTLYQTLAQKRNYYGF
LAADRIRLPYQFNPEKNTQLDQTALIKKYPALQRIAELIAVDWVKTAQVEWHYFLPNVAP
DELISIATLAKQWEQYPHAIRSLALAKEWDHINLRFPTPHKEPVMENAKKNDIEAAWIYG
IIRRESAFNEDIRSSAGAVGLMQIMPKTAKYIGKRIGNDKTSIYALTEAKNNIQLGSAYM
RYLSDKYNDNKVLATAAYNAGPHRVAQWTQNLLKLDADQWVDSIPFTETRNYVKAVLEYT
TVFNSLLHGQYARLSDQMPAIGSDNKLAEK
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctcaggcgcagccactgagcattgaacaaaaagcctatatcgatgcatacgaa
gcaatcaaacgcaacgaccgcgcagccatcgccagttacaaacaacaactacaaaattac
accctatatccctatgtcctctatcacgattaccgggtcaatattgatagcaccccaccg
cgggttatcgagtttttcctcaatcgctaccaagacctataccttagcgacaaactccgc
acccattggttaaaacaccttgccgcaaccaagcaatggccggagtatctgctgcactac
acaccacaaaacagccaatcgttacagtgcaatttctaccacgcgagcattgcctttgga
acggatgcacaaaaagaaaaggccattagtgccgcacagcagctttggcaaagtttaatt
gagattccagaagcctgtgttagtgtggaaaccgcgctgcgtaaccagaagaaattcact
gctcaaatggtttggaatcgaattacgcttttgattcagaaaaaacagtttagtcgtgca
caagacgcgagcaaagacctatccaatgccgacaaaaaagtcgttaacgcttggataaat
attgtgcgcaatccaaatttaacgagcaaagaaattacaaccattagcggctttgcccgc
aaagaagcgtttatacaagctgtaccttaccttgcgagccaaaatccgcagttggcacaa
agtgctttagcagagtttgccgaaccttatggcttaaatcaaagtcaacgcattgatatt
caacgaaaaattgcattacgcagcgcctatcgttaccaagaggaagcgaaagcactgctt
gaaaacgtcaacacccagggtaacggcagcgaagaaaccatacgttggcaagcacaaatc
gctctgcgcaattcgcgatggattgatttactcgacacgattgagttgatgagtaaagaa
gaacaagatagtaaccaatggcgttattggcgggcccgcgcgcttgaggcacgaggggat
cagaaaaccgcacacacgctctaccaaactcttgctcagaaacgaaactattacggtttt
cttgccgcagaccgaattcgattaccctaccaatttaatcccgaaaaaaatacccaactc
gaccagaccgcattaattaaaaaatacccagctctgcaaagaattgctgaattaattgcc
gttgactgggtcaaaacagcacaagtcgagtggcactattttttacccaatgttgcccct
gatgagcttatttcaatcgccaccttagccaagcagtgggaacagtacccacacgccatt
cgcagtttagcgctggccaaagagtgggatcatattaatttacgctttccaacccctcat
aaagagccggtcatggaaaatgccaaaaagaacgacattgaagcggcgtggatttacggg
attatccgccgtgaaagtgcatttaacgaagacattcgttcatcagcaggtgccgtcggg
ctcatgcaaattatgccgaaaaccgctaaatacataggtaaacgtatcggcaacgacaaa
acctcgatttatgcactaactgaagcgaaaaacaatattcaacttggcagtgcctatatg
cgttatctgtccgataaatacaacgataacaaagtactcgctaccgcagcgtataacgca
gggcctcatcgagtggcccagtggacgcaaaatctacttaagcttgatgctgatcaatgg
gtggactctattccgtttacagagacccgtaactatgtcaaagcagtattagagtacacc
acagtattcaattctttgttgcacggacaatatgctcgcttaagcgatcaaatgccggcg
attggtagcgataataaactggcggaaaagtaa
DBGET
integrated database retrieval system
