Thiosulfatimonas sediminis: THMIRHAS_12930
Help
Entry
THMIRHAS_12930 CDS
T06859
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
tse
Thiosulfatimonas sediminis
Pathway
tse00541
Biosynthesis of various nucleotide sugars
tse01100
Metabolic pathways
tse01250
Biosynthesis of nucleotide sugars
Module
tse_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
tse00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
THMIRHAS_12930 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
tse01005
]
THMIRHAS_12930 (kdsA)
Enzymes [BR:
tse01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
THMIRHAS_12930 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
tse01005
]
Lipid A
THMIRHAS_12930 (kdsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
BBP45920
UniProt:
A0A6F8PVC1
LinkDB
All DBs
Position
1418095..1418934
Genome browser
AA seq
279 aa
AA seq
DB search
MQLCHFHAGLDKPLFLIAGPCVIESEAMAMNTAAALKTLTDELGIPFIYKSSFDKANRSS
TKSFRGLGIEEGLRILQKVKDEIGVPVLTDVHEDSPLDEVASVVNVMQTPAFLVRQTNFI
QNVCKQGLPVNIKKGQFQAPWDMEQVVAKAREVGNENIMVCDRGTSFGYNTLVSDMRGLA
QMRSTGCPVVFDATHSVQQPGGQGMTSGGQREMVPVLARAAIAAGISGLFMETHPDPSKA
LSDGPNMWPLGNLRPLLETMKELDDVVKKHGFIENSLLG
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgcaactttgtcattttcatgccggtttagataagccactgtttttaattgctgggcct
tgcgtcattgaatccgaagcgatggcaatgaacactgccgccgctctgaagaccttgacc
gatgagttgggtattccgtttatttacaagtcgtcttttgataaagccaatcgttcttcg
acaaaaagctttcgtggcttaggaatcgaagaaggattgcgtattttgcaaaaagtgaaa
gacgaaattggcgttccagtgttaaccgatgtccacgaagacagtccgttggatgaagtc
gcttcagtggtgaatgttatgcagacaccggcgtttttagtgcgccaaacgaactttatt
caaaatgtttgtaagcaagggttgcctgtcaatatcaaaaaagggcagttccaagcgcct
tgggatatggagcaagtcgttgccaaagcgcgtgaagtgggcaatgaaaatatcatggtc
tgtgatcgtgggacatcatttggttacaacaccttggtttcggatatgcgtggtttggcg
caaatgcgctcaaccggttgtcctgtggtatttgatgcaactcattcagtgcaacagcct
ggtggtcaggggatgacttccggcggacaacgtgagatggttcctgtattggcgcgcgcg
gcaattgcggcgggtatcagcggtctttttatggaaacacatccagacccttcaaaggca
ctgagtgacggcccaaatatgtggccgctaggcaaccttagaccgctattggaaacgatg
aaagagcttgacgatgtcgtcaaaaagcacggattcatcgaaaatagcctattaggttaa
DBGET
integrated database retrieval system
