Thiosulfatimonas sediminis: THMIRHAS_13990
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Entry
THMIRHAS_13990 CDS
T06859
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tse
Thiosulfatimonas sediminis
Brite
KEGG Orthology (KO) [BR:
tse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tse03016
]
THMIRHAS_13990 (truB)
Enzymes [BR:
tse01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
THMIRHAS_13990 (truB)
Transfer RNA biogenesis [BR:
tse03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
THMIRHAS_13990 (truB)
Prokaryotic type
THMIRHAS_13990 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
PUA_3
TruB_C
Motif
Other DBs
NCBI-ProteinID:
BBP46026
UniProt:
A0A6F8PVA3
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All DBs
Position
complement(1536881..1537777)
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AA seq
298 aa
AA seq
DB search
MAQHRNPPKQAVHGIVLLNKAAGGSSNDVLQKVRRIFNAQKAGHTGALDPFATGLLPICL
GEATKVSGLLLDSDKRYTATLKLGEQSDTGDTEGTIVQTAAVVELNADLIRSCLAGFVGQ
IEQIPPMYSALKHQGKPLYWYARQGIEIERPARPITIYALELIRFSANEVVFDVHCSKGT
YVRTLGEDIAKALGTLGHLTALHRTQTGSLSGDAMLTLEQIEQQKEACLQPLDIALAHLP
RLDLAQAQAAHVLQGGMLRLAQPEGGLVRFYDHNGVFIGVGEWHEKNQLIKPKRLFNF
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacatcgtaatcccccgaaacaagcggtgcatggtattgtgctgctgaataaa
gccgcaggtggttcatcaaatgatgttctgcaaaaggtgcgacggatttttaatgcccaa
aaagccgggcacactggcgcgttggatccttttgccactgggttgctacccatctgttta
ggtgaagcgactaaggtgtctgggcttttgttggattccgacaagcgctataccgcaacc
ctcaagctgggcgagcagagtgataccggcgacaccgaaggcacgattgtgcaaacggca
gcggtagtggaattaaatgccgaccttattcgttcttgtttggctggttttgttgggcag
attgagcaaattccaccgatgtattcggcgttaaagcatcaggggaagccgctgtattgg
tatgctcgtcaaggaattgaaattgagcgtccagccagacccatcaccatttatgcgctg
gagctgattcgctttagcgctaacgaggtggtctttgatgtgcattgttcgaaaggcacc
tacgtgcgtaccttgggtgaagatattgctaaggcgctaggtacccttggtcatttgacc
gccttgcatcgcacgcaaaccggcagcctatcaggcgatgcaatgttgacattagagcag
attgagcagcaaaaagaagcgtgtttacagcctttggacattgctctggcccatttgcca
cgccttgatttggcgcaagcccaagcggctcatgtcttgcagggtggaatgttgcgttta
gcccaacccgaaggggggttagtgcgcttctatgaccataatggcgtgtttattggtgtc
ggtgaatggcatgagaagaatcagttaatcaagccaaaacgtctgtttaatttttaa
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