Thiosulfatimonas sediminis: THMIRHAS_15000
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Entry
THMIRHAS_15000 CDS
T06859
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
tse
Thiosulfatimonas sediminis
Pathway
tse03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
THMIRHAS_15000 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tse03400
]
THMIRHAS_15000 (recO)
DNA repair and recombination proteins [BR:
tse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
THMIRHAS_15000 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
THMIRHAS_15000 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
DAO_C
Motif
Other DBs
NCBI-ProteinID:
BBP46127
UniProt:
A0A6F8PVR0
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All DBs
Position
complement(1647191..1647979)
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AA seq
262 aa
AA seq
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MEHQADAFVLHSRPYKETGALVTFFCAQRGKFNAIISGVRGSKKAHLKAALLQPFQELQL
SWKEKAHSDLVSLRSLDAVSIRLPLDGQAAVCGLYANELLYRLLYPNVSFEHLYQDYGSL
LLHLTQLQLQDEQQQARQQSQALRWFELQLLSTLGHGFQFDYDLAGQEILAEQDYLFYPQ
HGFEILHLEQPIPSYALRISGSCILQLQDLLVQPLPQVTLCSQCLKPLRLLLSSALQPIL
GNKPIAARALLQKSIVPAQDSV
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
ttggaacatcaagctgatgcttttgtactgcacagtcggccttataaagaaacaggggct
ttagtcacttttttttgtgcgcaacgcggcaaatttaacgccattataagcggggtccgc
ggttcaaaaaaagcccatcttaaggccgcgctgctgcagccatttcaagaattgcagtta
agttggaaagagaaagctcattctgacttagtctctttacgaagccttgatgcggtttcg
attcgtctgcctttggacgggcaagctgcggtatgcggtctctacgccaatgaactgctc
tatcgtctgctttatccgaatgtctcttttgaacatctttatcaagattacggttctctt
ttattgcatttaacccagctgcaattacaagacgagcagcaacaggctcgacagcagtcg
caggccttacgttggtttgaactgcaattactcagtaccttggggcatggttttcagttt
gattacgatctggctgggcaagaaatccttgctgagcaagactatcttttttatccgcag
cacggttttgaaatcttacatcttgaacagccgattccttcttatgcgctgcgtattagt
ggcagttgtattttgcaattacaggatttacttgtacaaccattgccgcaagtgacctta
tgtagccaatgtcttaagccgttgcgtttgttgcttagcagtgctttgcagcctattctt
ggcaataaaccgattgcggcacgtgcgctattgcaaaaatcgatcgtgccagcgcaagat
tcggtttga
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