Thiosulfatimonas sediminis: THMIRHAS_18480
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Entry
THMIRHAS_18480 CDS
T06859
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
tse
Thiosulfatimonas sediminis
Pathway
tse03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tse00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
THMIRHAS_18480 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tse03019
]
THMIRHAS_18480 (orn)
03009 Ribosome biogenesis [BR:
tse03009
]
THMIRHAS_18480 (orn)
Messenger RNA biogenesis [BR:
tse03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
THMIRHAS_18480 (orn)
Ribosome biogenesis [BR:
tse03009
]
Eukaryotic type
Pre-60S particles
RNases
THMIRHAS_18480 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Sf6_terminase
Motif
Other DBs
NCBI-ProteinID:
BBP46475
UniProt:
A0A6F8PWH9
LinkDB
All DBs
Position
complement(1999854..2000411)
Genome browser
AA seq
185 aa
AA seq
DB search
MKSDNNLIWIDLEMTGLDPKEHTIIEIATVVTDSQLNILAKGPVLAIQTAQSELDKMDNW
CVTHHGNSGLTARVQASEISMEAAQQQTIAFLSDYVPAGKSPMCGNSICQDRRFMVEHMP
QLEAFFHYRNLDVSTLKELARRWAPAVYSAHQKQGSHLAMDDILESIDELNHYRKGLFAT
SFQSV
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcagataacaacttaatttggattgatttggaaatgaccggcctggatccaaaa
gagcacaccattattgagattgcgacggtggtcaccgacagtcaattaaatatccttgcc
aaggggcctgttctggcgattcagaccgcgcaaagtgagttggataagatggataactgg
tgtgtgacgcatcatggtaattccggtctgacggcacgtgttcaggccagtgaaattagc
atggaagcagcacagcagcagaccatcgcgtttttgagcgactatgtgccggccggtaaa
tcaccaatgtgtggtaattcgatctgccaagatcgccgttttatggtcgaacatatgccg
caattggaggcgttttttcattatcgtaatttggatgtcagtactttaaaagagttggca
cgacgttgggcgcccgcggtctatagcgcccatcaaaaacagggcagtcatttggcgatg
gacgacattttggagtcgattgacgaacttaatcactaccgaaaaggactgttcgctacc
tcgtttcagagcgtctaa
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