Thiosulfatimonas sediminis: THMIRHAS_19460
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Entry
THMIRHAS_19460 CDS
T06859
Name
(GenBank) ATP-dependent helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
tse
Thiosulfatimonas sediminis
Brite
KEGG Orthology (KO) [BR:
tse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tse03400
]
THMIRHAS_19460
Enzymes [BR:
tse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
THMIRHAS_19460
DNA repair and recombination proteins [BR:
tse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
THMIRHAS_19460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_22
DEAD
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
BBP46573
UniProt:
A0A6F8PWQ3
LinkDB
All DBs
Position
complement(2104227..2107772)
Genome browser
AA seq
1181 aa
AA seq
DB search
MNNMNPTYPDVQQIFALELDGQLDDAQARLQAIDPFHSFIVQAPAGSGKTSLLTQRYLGL
LSQVKAPEQIVAMTFTKKAAAEMRERIMKALQLGAHSLAEDAGLVERNTWKLARKALQQD
QNLGWQLLNNPNRLRIKTIDGFNSFLVGQMPVLSKMGTQLKLSDKPQQVYQEAVRQVLQE
EDFVPLVEPLLMLVNGRYTRAENLLCAMLAKRDQWMDHLQYVDSGAREELQNALKEIVLS
ELRQHRQSLSKVEALLAEVCDIADYAQHNDQPDLVNIASAWPFAENDTESWRVLAAWVLT
KDSKKVRARLTKNEGFPTGKGLAKERKEQMVQVLQGISDADDLQGTLVSALAALKDLPDP
HYTDQQWQILQSLMQLLKICAGYLKLVFQSRAEADFIEIAQSASQALGHKDEPTDLALQL
DYQIQHLLIDEFQDTSSKQFELVEKLVAGWQEDDARTLFIVGDPMQSIYRFREAEVANFL
KAWQGRLGNVALQPLNLTVNFRSQKQVVDWVNHTFQKVLPKNDDMAKGAVKFSKALTQRD
DLEPAVFHHWECAGDGQQSERIVEFIVQRLSELRQQEEARNEALYSRKIAILGRSRSHLM
VIAQQLKKSAIAFRAVELEALKDRQEVQDCLALSRAFLHLGDRAAWIALLRSPLVGLNLH
DLHALIADKPYKTVVFCLEQALQPNGLIDFSRLSAEGQARIMQTWPILQNAIAQLGVHPF
SKLIKECWLMLDGALSVENSVALQNVASYFEVLAQFDHDVLGMTLLESLVETLYASADAS
EASQQIEIMTMHKSKGLEFDTVILPGLNKKPRNKDPELVSWFQFMDTKQKEHLVLAPIDQ
KGQEKSYLSRLLTQFESHKQQYELGRLLYVACTRAKVQLHLFAELKIQQDTDVTLFAPTK
SSMLEALWPAVQTSVVAAIEQQLNSASLDDKPVAMQAPSIAVARLPLQRKGLFAYLAHLD
RPQLLKNKNKPDDAPSIASVVTQGVVPETPQPEYWQAENLVSKAAGNLVHKVLEQWARTG
IEHVADMALQKQTDFYLRWLQQQGLDAAQTQRAWQKVASCLKNAYENPQMRWALSQSRQH
ALSEYALQSLNAQGEIEQHIIDYTLIDDDGVRWIIDYKTSACEVCDSAAQRAEFIEMQQQ
YYAPQLHRYAELFRAQENRPQKLVLYLAAIDVWTEVANHAQ
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgaataatatgaatcctacttatccagatgttcaacagatctttgctttagagttagat
ggtcagctcgatgatgcgcaagctcgtttacaggcgattgacccttttcattcgtttatt
gttcaagcacccgcgggctctggaaaaacctcgctgttgacgcagcgctatttggggctc
ttgtcgcaggtgaaagcgccggaacaaattgtcgccatgacttttaccaaaaaggcggcg
gcagaaatgcgcgaacggattatgaaagcactgcaactgggtgcccattctctagcagaa
gacgccggtttggtggagcgaaacacctggaagttggcacgaaaagctttgcagcaagat
caaaatttggggtggcagttattaaataacccgaatcgcctgcggattaaaaccattgat
ggttttaatagttttttggttggccagatgccggtgctgtccaaaatgggaacgcaattg
aagttaagcgacaagccgcagcaagtctatcaagaagcggtgcgccaagtattgcaagaa
gaggattttgttcctttagtagagcccttattgatgctggttaatgggcgttacacgcgt
gcagaaaatttattgtgtgcgatgcttgcgaaacgtgatcagtggatggaccatctgcaa
tatgtcgattcgggcgctcgagaagagctgcaaaatgcattgaaggaaattgtgctcagt
gaattgcgccagcatcggcaatcgctaagtaaagtcgaagccttattagcagaagtttgc
gatattgctgattatgcacagcataatgaccaaccggatttagtgaatattgccagcgca
tggccgtttgctgaaaatgatactgagtcctggcgggtgctggcggcgtgggttttgacc
aaagacagcaaaaaagtgcgagcccggcttaccaaaaatgaagggtttccgacgggtaaa
gggttagctaaggagcgcaaagagcagatggtgcaagtcttgcaaggcattagtgatgcc
gatgatttgcaggggactttggtgagtgcattggcggcgttaaaagacttgcctgacccg
cattacactgatcagcagtggcagatattgcaaagtttaatgcagttgttaaaaatctgc
gcagggtatttaaagctggtttttcaaagccgtgctgaggcagattttatcgaaatcgcg
cagtccgcttctcaggcattggggcataaagatgagccaaccgatttggcgttgcaactg
gattatcagattcaacatttgctgattgatgagtttcaagataccagtagcaaacagttt
gagttagtcgagaaattggttgccggttggcaggaggacgatgcgcgcaccctgtttata
gtgggcgacccaatgcaatctatctatcgttttcgtgaagccgaggttgcgaattttctc
aaggcgtggcaaggacgtttgggaaatgtggcgctgcaaccgttgaatttaaccgtcaat
tttcgttcacaaaaacaagtggttgattgggttaatcacacctttcaaaaagtcttgccc
aaaaacgacgacatggctaaaggagcggtcaaattcagtaaagccttgacccaacgagat
gatctggagccagctgtattccaccattgggagtgtgctggcgacggccaacaaagcgaa
cgtattgttgagtttatcgtgcagcgtttaagcgagttgcgtcagcaagaagaggcaaga
aatgaagctctttatagccggaaaattgcgatattaggacgttcccgttcgcatctaatg
gtgattgcgcaacagttgaaaaaatcggcaattgcttttcgtgcggtcgagttggaggcc
ttgaaagatcgccaagaagtgcaggattgtctggcgttgagcagagcgtttttgcatttg
ggtgatcgtgccgcatggattgcgttattgcgttctcctttagtaggtttgaatttgcat
gatttgcacgccttgattgctgataagccttataaaacggtggtgttttgccttgagcag
gctttgcaaccgaatggcttgattgattttagccgtctgagtgcggaagggcaggctcgt
attatgcaaacttggcccattttgcagaatgccattgcccagctgggtgtacatccgttt
agcaagttaatcaaagagtgctggttgatgttggatggtgctttgagtgttgaaaactcg
gtcgctttacagaatgttgcctcctattttgaggtgctcgcgcagtttgatcacgatgtt
ttgggtatgacgcttttagaatcgttggtcgagaccctctatgccagtgcggatgcctct
gaggcaagtcagcaaattgaaattatgacgatgcacaaatccaagggattggagtttgat
acggtgattttgccaggtttaaacaaaaaaccgcgcaataaagatccggagttggtgtct
tggtttcagtttatggataccaagcaaaaagagcatttagtgctggcgccgattgatcaa
aaagggcaagaaaagtcgtatttaagtcgcttgttaacccagtttgaatcacacaaacag
caatatgagttggggcgattattgtatgtggcgtgtactcgagccaaagtgcagttgcat
ttgtttgccgagttgaaaatacaacaagacaccgatgttacgctttttgcgccgacgaaa
agctcgatgcttgaagcgctttggccggcggttcagacgtcggttgtggcagcgattgaa
caacaactcaacagcgcgtcattggacgataaacctgttgcgatgcaagccccgtcgatt
gcggtcgctcgtttgccattacagcgaaagggtttgtttgcttacctggcgcatctcgac
agacctcaattactcaaaaataagaacaagccggatgacgcgcccagcatcgcttcggtt
gtaacacagggcgtcgtgccagaaacgccgcaaccagagtattggcaggcggagaatctc
gtcagtaaagcggccggtaatctggttcataaagtcttagaacagtgggcgcgtactggt
attgaacatgttgctgatatggccttgcaaaagcagactgatttttatctgcgttggctg
cagcagcaaggcttggatgctgcgcagacccaacgtgcttggcagaaagtcgccagttgt
ttaaaaaatgcctatgaaaaccctcaaatgcgttgggccttgtcgcaaagccggcagcac
gcgctcagcgagtatgcactccagtcgctcaatgcacagggagaaattgagcagcacatt
atcgattacaccttaattgacgatgatggagtgcgctggattattgattataaaaccagt
gcttgtgaggtgtgcgacagtgctgctcagcgcgcggaatttatcgagatgcagcaacag
tattacgccccgcaactgcatcgctatgcggaactttttcgtgcgcaagaaaaccgtccg
caaaaattggttttgtatttagcggccattgatgtttggacagaggtggcgaatcacgcc
caataa
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