Thiosulfatimonas sediminis: THMIRHAS_19550
Help
Entry
THMIRHAS_19550 CDS
T06859
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tse
Thiosulfatimonas sediminis
Pathway
tse03030
DNA replication
tse03430
Mismatch repair
tse03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
THMIRHAS_19550
03430 Mismatch repair
THMIRHAS_19550
03440 Homologous recombination
THMIRHAS_19550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tse03032
]
THMIRHAS_19550
03400 DNA repair and recombination proteins [BR:
tse03400
]
THMIRHAS_19550
Enzymes [BR:
tse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
THMIRHAS_19550
DNA replication proteins [BR:
tse03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
THMIRHAS_19550
DNA repair and recombination proteins [BR:
tse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
THMIRHAS_19550
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Crystall_4
Motif
Other DBs
NCBI-ProteinID:
BBP46582
UniProt:
A0A6F8PWQ1
LinkDB
All DBs
Position
2116195..2117082
Genome browser
AA seq
295 aa
AA seq
DB search
MNQSNPALAQCAQMLNQSDDFQVLRRLKATEQFNTATGDNAFHRVCVIDTETTGLNTAEC
EIIELGYQIIEFDSQGHFYRVLSAKNFLNEPQGKISAEVTKVTGLTLADVQGQQIPWDQV
ADDIAQVQLCVAHNAGFDRPVLERYHEVFVSKIWGCSVMQIDWDNLANVGSKSQEFLCWK
VGQFFYGAHRALDDVQALSELLAQPIGEAQMPAFHYLLKKVRIAKSLIAATGAPFEIKDQ
LRSRGYQWEATQRVWKKLLDDDQLQIEQAWLRENNTPNPSVLKLKATDTFSVRAR
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaagcaatcccgccttagcgcaatgcgcgcaaatgctcaaccaatccgatgat
ttccaagtgctacgtcgcctaaaagcgaccgaacaatttaatactgccactggcgataat
gcctttcatcgtgtctgcgtgattgataccgaaactacgggattaaataccgctgaatgc
gagattattgaattaggttatcaaatcatcgagtttgacagtcagggtcatttttatcgg
gttctgagcgccaaaaattttttaaacgaaccacaaggaaaaatcagcgcagaggtaacc
aaagtcaccggattaactttggccgatgtccaaggacaacagattccatgggaccaagtg
gctgatgacatcgcccaagtgcagctctgcgtagcacataatgccggatttgaccgcccc
gtgttagaacgctaccacgaggtatttgtcagcaaaatctggggctgttcagtcatgcaa
atcgactgggacaatcttgccaatgtaggctcaaaaagccaagaatttttatgctggaaa
gtcggtcaatttttctatggcgcacatcgcgcattagatgatgtgcaagcgctttcagaa
ttactggcacaaccgattggcgaagctcaaatgccggcattccattatttattgaaaaaa
gttcgcattgctaaatcgcttatcgccgcgaccggtgcgccttttgaaatcaaagaccaa
ctgcgcagccgcggttaccaatgggaggcgacacagcgtgtttggaaaaaacttctcgat
gacgatcaactgcagatcgaacaagcatggcttagagaaaacaatacgcccaatcctagc
gtgcttaagttaaaagcgactgacactttttcggtacgagcacgctaa
DBGET
integrated database retrieval system
