Thiosulfatimonas sediminis: THMIRHAS_20960
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Entry
THMIRHAS_20960 CDS
T06859
Symbol
miaB
Name
(GenBank) tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
tse
Thiosulfatimonas sediminis
Brite
KEGG Orthology (KO) [BR:
tse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tse03016
]
THMIRHAS_20960 (miaB)
Enzymes [BR:
tse01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
THMIRHAS_20960 (miaB)
Transfer RNA biogenesis [BR:
tse03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
THMIRHAS_20960 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
EspG
Motif
Other DBs
NCBI-ProteinID:
BBP46723
UniProt:
A0A6F8PX48
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All DBs
Position
complement(2278550..2279977)
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AA seq
475 aa
AA seq
DB search
MSQASSANGSPFEGGLYVITYGCQMNEYDSDKMASLLQKTYGLALVEDPEDADVVLMNTC
SVREKAQEKVFSELGRWSKWKAKKPNRVIGVGGCVASQEGNVIRQRAPSVDVIFGPQTLH
RLPAMIDEALRMRGDETIKKKKAVIDISFPEIEKFDNLPEPEVNGVSAMVSVMEGCSKYC
TFCVVPYTRGEEVSRPFEDVMREIRTLAEQGVREINLLGQNVNAYRGTMADGEIADLAVL
IHGMRTIDGIDRIRYTTSHPNEMTQSLIDCYAEVPELVSHLHLPIQTGSDRILAMMKRNH
MAIEYKSTIRKIRKIRPHLSLSGDFIVGFPGETCDDFKETLKLVEELNYDRSFSFIYSAR
PGTPAASYPDDETMDKKKRRLYHLQELLNKQTAEISESMVGTVQRILVERLSRNSFTEIA
GRTENNRVVNAEGSPDLIGQFVDVKITEAFANSLKGVIVATPEADKFGVSQFHAL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagcttcttctgccaatggttcgccttttgagggcggtctgtatgtgattact
tacggctgtcagatgaacgagtatgattcggacaagatggcgagtctgttgcaaaaaact
tacggtttagccttggtggaagacccggaagacgccgatgtggtgttgatgaacacctgc
tcggtgcgtgaaaaagcacaagagaaagttttctccgagttaggtcgttggtcgaaatgg
aaagcgaaaaagccgaaccgcgtcattggtgttggtggctgtgtggcttcacaggaaggc
aatgtcatccgtcagcgtgcgcccagtgtggatgtgattttcggcccgcaaactctgcat
cgtctaccggcaatgattgatgaagcgttacgtatgcgcggcgatgagacgattaagaag
aaaaaggcggttatcgacatctctttcccggaaatcgagaagttcgataacttgccggag
ccggaagtcaacggtgtatcggcgatggtctcggtgatggaagggtgctcgaaatattgc
accttctgcgtggtgccttatacccgcggcgaagaagtcagtcgtccgtttgaagatgtc
atgcgcgagattcgtacgcttgccgagcaaggtgtgcgtgaaatcaatctgcttgggcag
aatgtgaatgcttatcgcggcacgatggcggacggtgaaattgctgatttggcggtgttg
attcatggaatgcgcaccatcgacggcatcgaccggattcgttacaccacctcgcacccg
aacgagatgacccagtcgctgattgattgttatgcggaagtgcctgagttggtgtcgcat
ctgcatctgccaatccaaaccggatctgatcgcattttggcgatgatgaaacgcaatcac
atggcgatcgagtacaaatcaaccattcgtaaaatccgtaagattcgtccgcatttaagt
ttgtcgggcgattttatcgtcggctttccgggcgagacctgcgacgactttaaggagacc
ttaaagttggtggaggagttaaactacgaccgttcgtttagtttcatctattcggcgcgt
ccaggaacgccggcggcatcttacccagatgatgaaacgatggataagaaaaaacgtcgt
ctctatcatttgcaggagctgttgaataagcagaccgcagagatttccgaatcgatggtc
ggcacggtgcagcgtattctggtggagcgtttgtcgcgtaattcgtttaccgaaatcgcc
ggccgtacggaaaacaaccgcgtggtgaatgccgaaggttcaccggatttgattggtcag
tttgtggatgtcaaaattaccgaagcgtttgccaattctttaaaaggggtgattgtggcc
acgccggaagcggataagtttggcgtgtcacaatttcatgccttgtaa
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