Thiosulfatimonas sediminis: THMIRHAS_21530
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Entry
THMIRHAS_21530 CDS
T06859
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
tse
Thiosulfatimonas sediminis
Pathway
tse00300
Lysine biosynthesis
tse00470
D-Amino acid metabolism
tse01100
Metabolic pathways
tse01110
Biosynthesis of secondary metabolites
tse01120
Microbial metabolism in diverse environments
tse01230
Biosynthesis of amino acids
Module
tse_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tse00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
THMIRHAS_21530 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
THMIRHAS_21530 (lysA)
Enzymes [BR:
tse01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
THMIRHAS_21530 (lysA)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF1955
Motif
Other DBs
NCBI-ProteinID:
BBP46780
UniProt:
A0A6F8PXT7
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All DBs
Position
2332674..2333924
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AA seq
416 aa
AA seq
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MNPFSYQNGTLMAEAVDLQHLAKTYGTPLYVYSRAALEERWQAFDQAFGAQPHLVCYAVK
TNSNIAVLNVLAKIGAGFDIVSQGELERVLRAGGDPKKVVFSGVAKQPAEIKRALEVGIR
CFNIESHAELERIQEVAQQLNKIAPISIRVNPDVDAKTHPYISTGLKDNKFGVDINTAPE
LYQLAAQHSHIQPIGIDCHIGSQLTEIKPFVDALERVLALKAQLTQQGIELHHLDLGGGL
GIQYTDETPPAINEYIAALLAKLNDTQIEVIIEPGRAIAGNAGVLLTQVEFLKPTAHKNF
AIIDAAMNDLIRPALYQSFMDIIAVTPRTDGSDAQWDLVGPVCETGDFLGKGRNLNLKAG
DLLAVKSAGAYGFTMASNYNTRPRAAEIMVDGAEAHLIRRRETYDDLIGLESVITE
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaatccatttagctaccaaaacggcaccttaatggccgaagccgttgacctccaacac
ttagccaaaacttacggaaccccactgtatgtgtattcgcgtgccgcgctagaagaacgc
tggcaagcattcgatcaagcctttggcgcgcaaccacatctggtttgttatgcggtaaaa
accaactcgaacattgcggtactcaatgtattagcaaaaattggcgctggttttgacatc
gtttcacaaggcgagttggaacgcgtattacgtgctggtggcgatccaaaaaaagtggtc
ttttccggtgttgccaaacaacctgcagaaataaaacgcgcgctggaagtggggattcgc
tgttttaatattgaatcgcacgccgaactggagcgtattcaagaagtcgcgcaacagtta
aataaaatcgcgccgatttcgattcgcgtcaatccggatgtggatgccaaaacccatcct
tatatttcaacgggcttaaaagacaacaaattcggcgtggatatcaataccgcaccagaa
ctctatcagctcgccgcgcaacactcgcatattcaaccgatcggtatcgactgtcacatt
ggctcgcaactcaccgaaatcaaaccgtttgtcgatgcattagagcgtgtcttagcgctt
aaagctcagctcacccaacaaggcatagaactccaccacttagatttaggtggcggctta
gggattcaatacaccgatgaaacccctcccgcaatcaatgaatatattgccgcacttctg
gcgaaattaaacgatacgcagatcgaagtcattattgaacctggacgtgcaattgccggt
aatgccggagtgctattaacccaagttgagtttttaaaacccactgcacataaaaatttt
gcgattattgatgcggcgatgaacgacctaatccgtccggcactgtatcaatcgtttatg
gacatcatcgccgtcacaccgcgcaccgatggcagcgatgcacaatgggatttagttggc
cctgtgtgcgaaacgggcgatttcctcggcaagggacgcaatctgaacctaaaagccggt
gacctcttggctgtgaagtcggcaggcgcatacggttttacaatggcttccaactacaac
acccgcccacgtgccgccgaaatcatggtcgatggcgccgaagcacaccttattcgccgc
cgcgaaacctatgacgatctcatcggtttagaaagcgttatcaccgaataa
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