Thiosulfatimonas sediminis: THMIRHAS_21550
Help
Entry
THMIRHAS_21550 CDS
T06859
Name
(GenBank) SAM-dependent methyltransferase
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
tse
Thiosulfatimonas sediminis
Brite
KEGG Orthology (KO) [BR:
tse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tse03009
]
THMIRHAS_21550
Enzymes [BR:
tse01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
THMIRHAS_21550
Ribosome biogenesis [BR:
tse03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
THMIRHAS_21550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
PUA_3
Methyltransf_15
Methyltransf_31
Cons_hypoth95
MTS
FtsJ
Methyltransf_25
TRM5-TYW2_MTfase
UPF0020
PrmA
TRM
Spermine_synth
Methyltr_RsmB-F
Methyltransf_11
Methyltransf_3
BpsA_C
Methyltransf_12
Methyltransf_10
MT-A70
Motif
Other DBs
NCBI-ProteinID:
BBP46782
UniProt:
A0A6F8PXA0
LinkDB
All DBs
Position
complement(2335194..2336384)
Genome browser
AA seq
396 aa
AA seq
DB search
MLATLRLKKNEDRRIKQGHLWVFSNEVDINATPLKDFQPGQQVIIEADNGKPLGMGYVNP
NTLICARLLSRSAKLELNLKFLKKRIQEAQALRELSFDKPYYRLLFAEADGLPGLVIDRF
GDVFSVQISTAGMEVIKADILQVLENLYHPQAIVLKNNLAARELEGLPLYEEVLGELPEE
LIIEENATQFAIPVEAGQKTGWFYDHRQSRARLQSLSKGKRVLDVFSYLGGWGLACATAG
AAEVTCVDASELALDGVDKNAQLNGVQDKVVTIQGNAFDVLNALKTEEQKFDVVIVDPPA
FIKRKKDFKQGFEAYKRINQLAMRVLAKDGVLVSASCSHHLTRDQLLQAVQSAGRHIDRQ
VQLFDQGHQAPDHPVHPAIPESEYIKTLFFKVGPSW
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgctagccacgttacgcctgaaaaaaaatgaagatcgtcgcatcaagcaagggcacctt
tgggtgtttagtaatgaggtggatatcaatgccacgccgctgaaagattttcagcccggt
caacaagtcattatcgaagccgataacggcaagcccttaggcatgggttatgtcaatcct
aacactttaatttgcgcgcgattattaagtcgttcggccaagttggagttgaatttaaag
tttttgaaaaaacgcattcaagaagcacaagccttgcgtgagttaagttttgataagcca
tattatcggctgctttttgctgaagcggatggcttgccaggcctagtaatcgaccgtttt
ggcgatgtgttttcggtacagatttcgactgcgggtatggaggtaattaaagccgatatt
ctgcaagtcttggaaaacctttaccatcctcaggcgattgttttaaaaaataatctggca
gcgcgagaactcgaaggtctaccgctgtatgaagaagtgcttggcgaactgcccgaagaa
ctgattatcgaagagaatgctacgcaatttgcgataccggttgaagccggccagaaaacc
ggatggttttatgatcatcgccaatcgcgtgcccgtttgcaatcgttgagtaagggcaag
cgcgtgctggatgtttttagttatttaggtggttggggcttggcttgtgcaaccgctggt
gcggcagaggtgacgtgtgtcgatgcttctgaacttgcgttggatggcgtggataaaaat
gcgcaacttaacggtgtgcaagataaggtggttactattcaggggaatgcgtttgatgtg
ttgaacgccctaaaaaccgaagaacagaagtttgatgtggtcattgttgatccgccagca
tttattaaacgtaaaaaagatttcaagcagggctttgaagcctataaacgaattaaccag
ttggcgatgcgcgttttggcaaaagacggggttttggtttccgcttcttgttcgcatcat
ttaacgcgcgatcaactattgcaggcggtgcaatccgctggacgccatatcgatcgccaa
gtgcaactatttgatcaagggcatcaagcgccggatcatccggtgcatccggcgattcca
gaaagtgaatacattaaaacgctgttttttaaagtgggtccaagctggtaa
DBGET
integrated database retrieval system
