Thiosulfatimonas sediminis: THMIRHAS_23430
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Entry
THMIRHAS_23430 CDS
T06859
Name
(GenBank) ligand-gated channel
KO
K02014
iron complex outermembrane recepter protein
Organism
tse
Thiosulfatimonas sediminis
Brite
KEGG Orthology (KO) [BR:
tse00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tse02000
]
THMIRHAS_23430
Transporters [BR:
tse02000
]
Other transporters
Pores ion channels [TC:
1
]
THMIRHAS_23430
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
BBP46970
UniProt:
A0A6F8PYD0
LinkDB
All DBs
Position
complement(2537895..2540096)
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AA seq
733 aa
AA seq
DB search
MRLNKLTLALTVACGAPLSVAYAQETTVLEKITVSASPIHQHEVFDVPSQVDSVSGQAKA
QLESGSLGEMLANMPGVNNLSAGAQSGKPVIRGMTGERVKVLSNGASTDYQAYGTRHLPN
IDPYLAERIEVIRGPQSVLYGSEALGGVVNVLAPQMPFSQAAQGEADIEYNSNNNETHLG
VKMGSGSDKFALTVGASMRKGDNYRVPFAATAVNPVPNPGGSPAPDSRPLFIGEVPFTNF
QTRAANIGLGYREDWGQVTLRHSVWRSKQNYLGVESEDGGEFEPLAAGQILENQETQLAA
EVFADDWVIKPSWVYTVNDREASHDLPYESMAEDKGTDHYLDLQVVRHDWKLAAEHPNIG
DFEGEIGVEVTRKEQRLLSGHLTPSADVDKQAVYLFEEADYERWLVQFGARYDWHKVAAP
LDGNNEHFVEAGVFDGTNNTRDFAVWSGSLGATYRLTEEWSLAGNVARGFRAPSIFELYA
GGEHGGVQAYQIGNPDLQAEIALNTDLSLRWDNGTTQMVLTAYQNRVDNYIYLANTGNYR
CSEAGQESGACTENTVSSEPGAGLIPEMQAEQTDALIRGVEFNLEHRWNRRFQSALAVEW
IQGRDQNQARDLPLIPANNLFVKNSFYAADWQALKQQQWTLETKLVASKDSAGAYEPFSQ
FDGMTIGTASTKGYALWNLRYSAQIATQGKEKVQLNFAVENLFDRAYVDFLDTYKGYTLA
QGRNLKLNLRVDF
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaaataaattaacgctggcactgaccgtagcctgcggtgctccgctgtcggtg
gcttatgcccaagaaacaaccgttttagaaaaaatcactgtgtcggcctcgccgattcat
caacacgaagtctttgacgtgccatcgcaagtggacagtgttagtggtcaagccaaagcg
cagctagaaagtggctcgctcggggagatgctggcgaatatgccgggggtgaataattta
tcggcaggagcacagtccggtaaaccggtgattcgaggaatgaccggcgagcgcgttaag
gtgctgtcgaatggagcaagtacggattatcaagcttacggcacgcgtcacttgccgaac
attgatccgtatttggcagagcgtattgaagtgattcgtgggccgcaaagtgttctttat
ggttctgaggctttgggcggtgtggtcaatgttctagcgccacaaatgcctttttcgcaa
gcggcgcaaggcgaagcggatatcgagtacaacagtaataataacgaaacccatttgggc
gtgaaaatggggtctggcagtgataagtttgcgctaaccgttggcgcctcgatgcgtaag
ggcgataactaccgcgtgccatttgccgctacggcggtaaatcccgtgcctaatccaggg
ggaagtcctgcgccagacagccgcccgctgtttatcggtgaagtgccgtttaccaatttt
caaacgcgtgcggcgaatatcggtttaggttatcgcgaagactgggggcaagtgaccttg
cgtcattctgtttggcgatctaagcaaaactatttgggcgttgaatcagaagatggtggt
gaatttgagcctttagcggcaggtcagattttggaaaaccaagagacgcaactggcggct
gaagtgtttgctgacgactgggttatcaaaccgagctgggtctataccgtgaatgaccgc
gaggcatcgcatgatttaccgtatgagagcatggccgaggacaaaggtactgatcattat
ctggatttgcaagtggtccgtcatgactggaaattggccgctgaacacccgaatatcggt
gatttcgagggcgagattggggttgaagtgacgcgtaaagaacagcgtttgttgagcggg
catttaacccctagcgccgatgttgataaacaggcggtttatctgtttgaagaagcggat
tatgagcgttggttagtgcagtttggcgcgcgttacgattggcataaagtggctgcgcca
ttggatggcaacaatgaacattttgttgaagccggggtgtttgacgggacgaacaatacg
cgtgattttgccgtttggtcgggttcgcttggggcgacgtatcgtttaaccgaagaatgg
agtttggctggtaatgtcgcacgcggtttccgtgcgccaagtatttttgagttgtatgcg
ggcggtgagcatggcggcgttcaggcttatcaaatcggtaatccagatttgcaggcggaa
atagcattgaataccgatctgtccttacgttgggataatggaaccacgcaaatggtgctg
acggcctatcaaaatagggtggacaactacatttatttggcgaatacggggaactaccgc
tgtagtgaagcgggtcaagaaagtggtgcttgtactgaaaatacggtcagtagcgaacct
ggtgcgggcttaattccagaaatgcaggctgaacagacggatgcgttaattcgcggtgtg
gaatttaatcttgagcatcgttggaatcgccgattccaatcggcgttggctgtggagtgg
attcaaggtcgtgaccaaaatcaagcacgtgacttacctttgattccggccaataatctg
tttgtcaaaaacagtttttatgcagcggattggcaggcattaaaacagcagcaatggacg
ctggaaaccaaattggtcgccagtaaggattcagcgggtgcttatgaaccgttttcgcag
tttgatggtatgaccatcggcacggcgtcaactaagggctatgctttgtggaatctgcgt
tatagcgcgcaaatcgctacccaaggtaaagaaaaggtgcagttgaattttgcggtggag
aatctgtttgaccgcgcttatgtggatttcttggatacctataaaggttataccttggca
caagggcgtaatttgaaactcaatctgcgggttgatttttaa
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